RNA–Protein interactions for RNA: ENST00000465528.1

NOTCH4-202, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-202ENST00000465528 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
NOTCH4-202ENST00000465528 MCM10Q7L590 875 aa17.14■□□□□ 0.33
NOTCH4-202ENST00000465528 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
NOTCH4-202ENST00000465528 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
NOTCH4-202ENST00000465528 DDNO94850 711 aaPredicted RBP17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 ST5P78524 1137 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 C7orf43Q8WVR3 580 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
NOTCH4-202ENST00000465528 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 NPHP1O15259 732 aa17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 CFAP53Q96M91 514 aa17.12■□□□□ 0.33
NOTCH4-202ENST00000465528 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
NOTCH4-202ENST00000465528 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
NOTCH4-202ENST00000465528 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
NOTCH4-202ENST00000465528 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
NOTCH4-202ENST00000465528 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
NOTCH4-202ENST00000465528 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
NOTCH4-202ENST00000465528 KLRG2A4D1S0 409 aaPredicted RBP17.1■□□□□ 0.33
NOTCH4-202ENST00000465528 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
NOTCH4-202ENST00000465528 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
NOTCH4-202ENST00000465528 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
NOTCH4-202ENST00000465528 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
NOTCH4-202ENST00000465528 HLFQ16534 295 aa17.08■□□□□ 0.32
NOTCH4-202ENST00000465528 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
NOTCH4-202ENST00000465528 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
NOTCH4-202ENST00000465528 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
NOTCH4-202ENST00000465528 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 NPR1P16066 1061 aa17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 TNS4Q8IZW8 715 aa17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 ZNF652Q9Y2D9 606 aa17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
NOTCH4-202ENST00000465528 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
NOTCH4-202ENST00000465528 CCDC93Q567U6 631 aa17.06■□□□□ 0.32
NOTCH4-202ENST00000465528 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
NOTCH4-202ENST00000465528 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
NOTCH4-202ENST00000465528 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 RGL2O15211 777 aa17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
NOTCH4-202ENST00000465528 ZNF541Q9H0D2 1346 aa17.04■□□□□ 0.32
NOTCH4-202ENST00000465528 CAPN15O75808 1086 aa17.04■□□□□ 0.32
NOTCH4-202ENST00000465528 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
NOTCH4-202ENST00000465528 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
NOTCH4-202ENST00000465528 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
NOTCH4-202ENST00000465528 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
NOTCH4-202ENST00000465528 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
NOTCH4-202ENST00000465528 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
NOTCH4-202ENST00000465528 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
NOTCH4-202ENST00000465528 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
NOTCH4-202ENST00000465528 NGEFQ8N5V2 710 aa17.01■□□□□ 0.31
NOTCH4-202ENST00000465528 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
NOTCH4-202ENST00000465528 FZD9O00144 591 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
NOTCH4-202ENST00000465528 CRY2Q49AN0 593 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 TTLL7Q6ZT98 887 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 SYNE4Q8N205 404 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 SNED1Q8TER0 1413 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
NOTCH4-202ENST00000465528 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 CNTNAP1P78357 1384 aa16.99■□□□□ 0.31
NOTCH4-202ENST00000465528 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
NOTCH4-202ENST00000465528 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
NOTCH4-202ENST00000465528 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
NOTCH4-202ENST00000465528 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
NOTCH4-202ENST00000465528 SCN4AP35499 1836 aa16.98■□□□□ 0.31
NOTCH4-202ENST00000465528 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
NOTCH4-202ENST00000465528 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
NOTCH4-202ENST00000465528 EPHX2P34913 555 aa16.97■□□□□ 0.31
NOTCH4-202ENST00000465528 PSMD1Q99460 953 aa16.97■□□□□ 0.31
NOTCH4-202ENST00000465528 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
NOTCH4-202ENST00000465528 FOXN1O15353 648 aa16.96■□□□□ 0.31
NOTCH4-202ENST00000465528 VEGFBP49765 207 aa16.96■□□□□ 0.31
NOTCH4-202ENST00000465528 SUSD4Q5VX71 490 aa16.96■□□□□ 0.31
NOTCH4-202ENST00000465528 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
NOTCH4-202ENST00000465528 COL4A5P29400 1685 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 TMEM88BA6NKF7 163 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 MYL6BP14649 208 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 GPTP24298 496 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
NOTCH4-202ENST00000465528 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
NOTCH4-202ENST00000465528 NUP98P52948 1817 aa16.94■□□□□ 0.3
NOTCH4-202ENST00000465528 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms