RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 COPS6Q7L5N1 327 aa23.76■■□□□ 1.39
SCAMP3-204ENST00000465312 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
SCAMP3-204ENST00000465312 CAMTA2O94983 1202 aa23.74■■□□□ 1.39
SCAMP3-204ENST00000465312 MMP10P09238 476 aa23.74■■□□□ 1.39
SCAMP3-204ENST00000465312 PARP3Q9Y6F1 533 aa23.74■■□□□ 1.39
SCAMP3-204ENST00000465312 NPHP1O15259 732 aa23.73■■□□□ 1.39
SCAMP3-204ENST00000465312 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
SCAMP3-204ENST00000465312 MAP3K15Q6ZN16 1313 aa23.73■■□□□ 1.39
SCAMP3-204ENST00000465312 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-204ENST00000465312 LRP5O75197 1615 aa23.71■■□□□ 1.39
SCAMP3-204ENST00000465312 PTGER2P43116 358 aa23.71■■□□□ 1.39
SCAMP3-204ENST00000465312 BCL2L12Q9HB09 334 aa23.71■■□□□ 1.39
SCAMP3-204ENST00000465312 DDX58O95786 925 aaKnown RBP23.7■■□□□ 1.38
SCAMP3-204ENST00000465312 TBC1D9BQ66K14 1250 aa23.7■■□□□ 1.38
SCAMP3-204ENST00000465312 TRMT2AQ8IZ69 625 aaKnown RBP23.7■■□□□ 1.38
SCAMP3-204ENST00000465312 HLFQ16534 295 aa23.69■■□□□ 1.38
SCAMP3-204ENST00000465312 LRP10Q7Z4F1 713 aa23.69■■□□□ 1.38
SCAMP3-204ENST00000465312 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
SCAMP3-204ENST00000465312 SETDB2Q96T68 719 aa23.69■■□□□ 1.38
SCAMP3-204ENST00000465312 FAM177BA6PVY3 158 aa23.68■■□□□ 1.38
SCAMP3-204ENST00000465312 ERVV-1B6SEH8 477 aa23.68■■□□□ 1.38
SCAMP3-204ENST00000465312 NFIXQ14938 502 aa23.68■■□□□ 1.38
SCAMP3-204ENST00000465312 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
SCAMP3-204ENST00000465312 NIP7Q9Y221 180 aaKnown RBP eCLIP23.68■■□□□ 1.38
SCAMP3-204ENST00000465312 GPTP24298 496 aa23.67■■□□□ 1.38
SCAMP3-204ENST00000465312 ANKRD13DQ6ZTN6 518 aa23.67■■□□□ 1.38
SCAMP3-204ENST00000465312 BCL2L13Q9BXK5 485 aa23.67■■□□□ 1.38
SCAMP3-204ENST00000465312 FKBP5Q13451 457 aaPredicted RBP23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 PLBD2Q8NHP8 589 aa23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 SGIP1Q9BQI5 828 aa23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 SMC4Q9NTJ3 1288 aa23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 COL24A1Q17RW2 1714 aa23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 NUP98P52948 1817 aa23.66■■□□□ 1.38
SCAMP3-204ENST00000465312 CT47B1P0C2W7 299 aaPredicted RBP23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 DDR1Q08345 913 aa23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 FLIIQ13045 1269 aa23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 HSP90AB3PQ58FF7 597 aa23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 GIGYF2Q6Y7W6 1299 aaKnown RBP23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 G2E3Q7L622 706 aa23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
SCAMP3-204ENST00000465312 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
SCAMP3-204ENST00000465312 ZNF428Q96B54 188 aa23.64■■□□□ 1.37
SCAMP3-204ENST00000465312 SERPINB2P05120 415 aa23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 GTF2E1P29083 439 aaPredicted RBP23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 TM4SF1P30408 202 aa23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 NBPF5PQ86XG9 351 aaPredicted RBP23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 CACNA1FO60840 1977 aa23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
SCAMP3-204ENST00000465312 RGL2O15211 777 aa23.62■■□□□ 1.37
SCAMP3-204ENST00000465312 SSH1Q8WYL5 1049 aa23.62■■□□□ 1.37
SCAMP3-204ENST00000465312 ALDH1L2Q3SY69 923 aa23.61■■□□□ 1.37
SCAMP3-204ENST00000465312 FHDC1Q9C0D6 1143 aaPredicted RBP23.61■■□□□ 1.37
SCAMP3-204ENST00000465312 MAP3K2Q9Y2U5 619 aa23.61■■□□□ 1.37
SCAMP3-204ENST00000465312 ATP10DQ9P241 1426 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 PI4KAP2A4QPH2 592 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 PI4KAP1Q8N8J0 262 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 CNBD1Q8NA66 436 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 MYD88Q99836 296 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
SCAMP3-204ENST00000465312 ATP5J2-PTCD1G3V325 749 aa23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 ST5P78524 1137 aa23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 TCIRG1Q13488 830 aa23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 KSR2Q6VAB6 950 aa23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 MRPL50Q8N5N7 158 aaKnown RBP23.59■■□□□ 1.37
SCAMP3-204ENST00000465312 PARP10Q53GL7 1025 aa23.58■■□□□ 1.37
SCAMP3-204ENST00000465312 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.37
SCAMP3-204ENST00000465312 AFDNP55196 1824 aaKnown RBP23.58■■□□□ 1.37
SCAMP3-204ENST00000465312 TPTE2Q6XPS3 522 aa23.57■■□□□ 1.36
SCAMP3-204ENST00000465312 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
SCAMP3-204ENST00000465312 NYXQ9GZU5 481 aa23.57■■□□□ 1.36
SCAMP3-204ENST00000465312 UBN2Q6ZU65 1347 aa23.57■■□□□ 1.36
SCAMP3-204ENST00000465312 RARSP54136 660 aaKnown RBP23.56■■□□□ 1.36
SCAMP3-204ENST00000465312 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
SCAMP3-204ENST00000465312 ADCY9O60503 1353 aa23.55■■□□□ 1.36
SCAMP3-204ENST00000465312 PRR5LQ6MZQ0 368 aa23.55■■□□□ 1.36
SCAMP3-204ENST00000465312 SLC4A10Q6U841 1118 aa23.55■■□□□ 1.36
SCAMP3-204ENST00000465312 DNAAF4Q8WXU2 420 aa23.55■■□□□ 1.36
SCAMP3-204ENST00000465312 METTL22Q9BUU2 404 aaPredicted RBP23.55■■□□□ 1.36
SCAMP3-204ENST00000465312 F6X3S4 739 aa23.54■■□□□ 1.36
SCAMP3-204ENST00000465312 SUSD4Q5VX71 490 aa23.54■■□□□ 1.36
SCAMP3-204ENST00000465312 NUTM1Q86Y26 1132 aa23.54■■□□□ 1.36
SCAMP3-204ENST00000465312 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-204ENST00000465312 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 NLRP10Q86W26 655 aa23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 FRAT1Q92837 279 aaPredicted RBP23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 SYT17Q9BSW7 474 aa23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 TRMT112Q9UI30 125 aaKnown RBP23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
SCAMP3-204ENST00000465312 PTPRCP08575 1304 aa23.52■■□□□ 1.36
SCAMP3-204ENST00000465312 KIF16BQ96L93 1317 aa23.52■■□□□ 1.36
SCAMP3-204ENST00000465312 SRCAPQ6ZRS2 3230 aa23.52■■□□□ 1.35
SCAMP3-204ENST00000465312 NRXN2Q9P2S2 1712 aa23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 BCAR3O75815 825 aa23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 PELP1Q8IZL8 1130 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 NLGN2Q8NFZ4 835 aa23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 ISCA1Q9BUE6 129 aa23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-204ENST00000465312 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms