RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
RTL9-201ENST00000465301 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 CCDC82Q8N4S0 544 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
RTL9-201ENST00000465301 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 NDC80O14777 642 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 CCDC14Q49A88 953 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 HMGB1P1B2RPK0 211 aaPredicted RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 IFIT3O14879 490 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 ZWINTO95229 277 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 NOP2P46087 812 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 GSDMDP57764 484 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 BCAR3O75815 825 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 BMS1Q14692 1282 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 PUF60Q9UHX1 559 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 UQCRFS1P1P0C7P4 283 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 KRT13P13646 458 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 MX1P20591 662 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 CNNM3Q8NE01 707 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 MYD88Q99836 296 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 GRIN2BQ13224 1484 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 ABCC11Q96J66 1382 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 TMCO5BA8MYB1 307 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 CKAP4Q07065 602 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 TCERG1LQ5VWI1 586 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 ZNF354CQ86Y25 554 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 NGLY1Q96IV0 654 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 CRNKL1Q9BZJ0 848 aaKnown RBP9.44□□□□□ -0.9
RTL9-201ENST00000465301 IMPG2Q9BZV3 1241 aa9.44□□□□□ -0.9
RTL9-201ENST00000465301 IQCGQ9H095 443 aaKnown RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 RASAL2Q9UJF2 1139 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 TAF7Q15545 349 aaPredicted RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 CCDC183Q5T5S1 534 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 CEP112Q8N8E3 955 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 TSR2Q969E8 191 aaKnown RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 STMN4Q9H169 189 aaPredicted RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 PSMD1Q99460 953 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 CCDC77Q9BR77 488 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 KLHL10Q6JEL2 608 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 NSRP1Q9H0G5 558 aaKnown RBP9.43□□□□□ -0.9
RTL9-201ENST00000465301 GRPEL1Q9HAV7 217 aa9.43□□□□□ -0.9
RTL9-201ENST00000465301 KIF21BO75037 1637 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 FGD5Q6ZNL6 1462 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 GNAQP50148 359 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
RTL9-201ENST00000465301 DDX19AQ9NUU7 478 aaKnown RBP9.42□□□□□ -0.9
RTL9-201ENST00000465301 ANAPC4Q9UJX5 808 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CASKIN1Q8WXD9 1431 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 ERBINQ96RT1 1412 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 PHACTR2O75167 634 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 TAF12Q16514 161 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 IL1RAPL2Q9NP60 686 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 RFC4P35249 363 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 SNX16P57768 344 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 HLTFQ14527 1009 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTL9-201ENST00000465301 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 TSPY2A6NKD2 308 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CAVIN2O95810 425 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 UBA7P41226 1012 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CEP135Q66GS9 1140 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
RTL9-201ENST00000465301 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
RTL9-201ENST00000465301 BCCIPQ9P287 314 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTL9-201ENST00000465301 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 FMNL3Q8IVF7 1028 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 NUDT16Q96DE0 195 aaKnown RBP9.41□□□□□ -0.9
RTL9-201ENST00000465301 EXOC1Q9NV70 894 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
RTL9-201ENST00000465301 ZNF622Q969S3 477 aaKnown RBP eCLIP9.41□□□□□ -0.9
RTL9-201ENST00000465301 PRG4Q92954 1404 aaPredicted RBP9.41□□□□□ -0.9
RTL9-201ENST00000465301 NCOA2Q15596 1464 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 UQCRHLA0A096LP55 91 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 UQCRHP07919 91 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 POLD1P28340 1107 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
RTL9-201ENST00000465301 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
RTL9-201ENST00000465301 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
RTL9-201ENST00000465301 IDEP14735 1019 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 ARL1P40616 181 aaPredicted RBP9.4□□□□□ -0.9
RTL9-201ENST00000465301 CCDC152Q4G0S7 254 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 MFSD6Q6ZSS7 791 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.9
RTL9-201ENST00000465301 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 SELENOOQ9BVL4 669 aa9.4□□□□□ -0.9
RTL9-201ENST00000465301 PTCD1O75127 700 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms