RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 TOMM70O94826 608 aa28.65■■■□□ 2.18
EDEM1-205ENST00000465187 PDE6BP35913 854 aa28.65■■■□□ 2.18
EDEM1-205ENST00000465187 DDX10Q13206 875 aaKnown RBP28.65■■■□□ 2.18
EDEM1-205ENST00000465187 RRAGCQ9HB90 399 aa28.65■■■□□ 2.18
EDEM1-205ENST00000465187 DICER1Q9UPY3 1922 aaKnown RBP28.63■■■□□ 2.17
EDEM1-205ENST00000465187 FAM177BA6PVY3 158 aa28.63■■■□□ 2.17
EDEM1-205ENST00000465187 LMNB1P20700 586 aa28.63■■■□□ 2.17
EDEM1-205ENST00000465187 EIF4A1P60842 406 aaKnown RBP28.63■■■□□ 2.17
EDEM1-205ENST00000465187 NGEFQ8N5V2 710 aa28.63■■■□□ 2.17
EDEM1-205ENST00000465187 NPHP1O15259 732 aa28.62■■■□□ 2.17
EDEM1-205ENST00000465187 NEFMP07197 916 aa28.62■■■□□ 2.17
EDEM1-205ENST00000465187 SRGNP10124 158 aa28.61■■■□□ 2.17
EDEM1-205ENST00000465187 NBPF5PQ86XG9 351 aaPredicted RBP28.61■■■□□ 2.17
EDEM1-205ENST00000465187 ST5P78524 1137 aa28.6■■■□□ 2.17
EDEM1-205ENST00000465187 CLEC4GQ6UXB4 293 aa28.6■■■□□ 2.17
EDEM1-205ENST00000465187 NIP7Q9Y221 180 aaKnown RBP eCLIP28.6■■■□□ 2.17
EDEM1-205ENST00000465187 KDM2BQ8NHM5 1336 aa28.6■■■□□ 2.17
EDEM1-205ENST00000465187 MAPK8IP3Q9UPT6 1336 aa28.6■■■□□ 2.17
EDEM1-205ENST00000465187 WDR90Q96KV7 1748 aa28.6■■■□□ 2.17
EDEM1-205ENST00000465187 HTRA3P83110 453 aa28.58■■■□□ 2.17
EDEM1-205ENST00000465187 PRPF40BQ6NWY9 871 aaKnown RBP28.58■■■□□ 2.17
EDEM1-205ENST00000465187 TTLL7Q6ZT98 887 aa28.58■■■□□ 2.17
EDEM1-205ENST00000465187 RRP7AQ9Y3A4 280 aaKnown RBP28.57■■■□□ 2.16
EDEM1-205ENST00000465187 MYL6BP14649 208 aa28.56■■■□□ 2.16
EDEM1-205ENST00000465187 RALBP1Q15311 655 aa28.56■■■□□ 2.16
EDEM1-205ENST00000465187 STYK1Q6J9G0 422 aa28.56■■■□□ 2.16
EDEM1-205ENST00000465187 RBM46Q8TBY0 533 aaKnown RBP28.56■■■□□ 2.16
EDEM1-205ENST00000465187 PNISRQ8TF01 805 aaKnown RBP28.56■■■□□ 2.16
EDEM1-205ENST00000465187 ZNF652Q9Y2D9 606 aa28.56■■■□□ 2.16
EDEM1-205ENST00000465187 OLFM4Q6UX06 510 aa28.55■■■□□ 2.16
EDEM1-205ENST00000465187 CCDC146Q8IYE0 955 aa28.55■■■□□ 2.16
EDEM1-205ENST00000465187 ABCC12Q96J65 1359 aa28.54■■■□□ 2.16
EDEM1-205ENST00000465187 GLTPD2A6NH11 291 aa28.54■■■□□ 2.16
EDEM1-205ENST00000465187 RIPK4P57078 832 aa28.54■■■□□ 2.16
EDEM1-205ENST00000465187 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
EDEM1-205ENST00000465187 MASTLQ96GX5 879 aa28.54■■■□□ 2.16
EDEM1-205ENST00000465187 PDZRN3Q9UPQ7 1066 aa28.54■■■□□ 2.16
EDEM1-205ENST00000465187 ZC3H4Q9UPT8 1303 aaKnown RBP28.52■■■□□ 2.16
EDEM1-205ENST00000465187 CNKSR1Q969H4 720 aa28.52■■■□□ 2.16
EDEM1-205ENST00000465187 POTECB2RU33 542 aa28.51■■■□□ 2.15
EDEM1-205ENST00000465187 TMPOP42166 694 aaKnown RBP28.51■■■□□ 2.15
EDEM1-205ENST00000465187 NUTM1Q86Y26 1132 aa28.51■■■□□ 2.15
EDEM1-205ENST00000465187 C7orf43Q8WVR3 580 aa28.51■■■□□ 2.15
EDEM1-205ENST00000465187 ZBTB3Q9H5J0 574 aa28.51■■■□□ 2.15
EDEM1-205ENST00000465187 TSPYL4Q9UJ04 414 aa28.51■■■□□ 2.15
EDEM1-205ENST00000465187 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
EDEM1-205ENST00000465187 UBN2Q6ZU65 1347 aa28.5■■■□□ 2.15
EDEM1-205ENST00000465187 MYBBP1AQ9BQG0 1328 aaKnown RBP28.5■■■□□ 2.15
EDEM1-205ENST00000465187 KLRG2A4D1S0 409 aaPredicted RBP28.5■■■□□ 2.15
EDEM1-205ENST00000465187 APLP1P51693 650 aa28.5■■■□□ 2.15
EDEM1-205ENST00000465187 SLC51AQ86UW1 340 aa28.5■■■□□ 2.15
EDEM1-205ENST00000465187 ANXA1P04083 346 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 GPTP24298 496 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 TPTE2Q6XPS3 522 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 DNAJC5GQ8N7S2 189 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 TAOK3Q9H2K8 898 aa28.49■■■□□ 2.15
EDEM1-205ENST00000465187 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
EDEM1-205ENST00000465187 NEUROD2Q15784 382 aa28.48■■■□□ 2.15
EDEM1-205ENST00000465187 ERFEQ4G0M1 354 aa28.48■■■□□ 2.15
EDEM1-205ENST00000465187 LTBP3Q9NS15 1303 aa28.47■■■□□ 2.15
EDEM1-205ENST00000465187 NPR1P16066 1061 aa28.47■■■□□ 2.15
EDEM1-205ENST00000465187 LRP10Q7Z4F1 713 aa28.47■■■□□ 2.15
EDEM1-205ENST00000465187 RGL2O15211 777 aa28.46■■■□□ 2.15
EDEM1-205ENST00000465187 EIF2S2P20042 333 aaKnown RBP28.46■■■□□ 2.15
EDEM1-205ENST00000465187 PDIA6Q15084 440 aa28.46■■■□□ 2.15
EDEM1-205ENST00000465187 KRT24Q2M2I5 525 aa28.46■■■□□ 2.15
EDEM1-205ENST00000465187 ERVV-1B6SEH8 477 aa28.45■■■□□ 2.14
EDEM1-205ENST00000465187 NECTIN2Q92692 538 aa28.45■■■□□ 2.14
EDEM1-205ENST00000465187 VEGFAP15692 232 aaPredicted RBP28.44■■■□□ 2.14
EDEM1-205ENST00000465187 FSTL1Q12841 308 aa28.44■■■□□ 2.14
EDEM1-205ENST00000465187 SUSD4Q5VX71 490 aa28.44■■■□□ 2.14
EDEM1-205ENST00000465187 KIF6Q6ZMV9 814 aa28.44■■■□□ 2.14
EDEM1-205ENST00000465187 DDNO94850 711 aaPredicted RBP28.42■■■□□ 2.14
EDEM1-205ENST00000465187 C3orf67Q6ZVT6 689 aa28.42■■■□□ 2.14
EDEM1-205ENST00000465187 TRIM35Q9UPQ4 493 aa28.42■■■□□ 2.14
EDEM1-205ENST00000465187 ANKRD36CQ5JPF3 1778 aa28.42■■■□□ 2.14
EDEM1-205ENST00000465187 GTF2E1P29083 439 aaPredicted RBP28.41■■■□□ 2.14
EDEM1-205ENST00000465187 ZNF277Q9NRM2 450 aaPredicted RBP28.41■■■□□ 2.14
EDEM1-205ENST00000465187 ADAMTS8Q9UP79 889 aa28.41■■■□□ 2.14
EDEM1-205ENST00000465187 CCDC93Q567U6 631 aa28.4■■■□□ 2.14
EDEM1-205ENST00000465187 ZNF34Q8IZ26 560 aa28.4■■■□□ 2.14
EDEM1-205ENST00000465187 SMC1BQ8NDV3 1235 aa28.4■■■□□ 2.14
EDEM1-205ENST00000465187 SNED1Q8TER0 1413 aa28.4■■■□□ 2.14
EDEM1-205ENST00000465187 LAMB2P55268 1798 aa28.39■■■□□ 2.13
EDEM1-205ENST00000465187 NTSR2O95665 410 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 POTEIP0CG38 1075 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 POTEJP0CG39 1038 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 CRY2Q49AN0 593 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 GIGYF2Q6Y7W6 1299 aaKnown RBP28.38■■■□□ 2.13
EDEM1-205ENST00000465187 COL4A5P29400 1685 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 ERBB4Q15303 1308 aa28.38■■■□□ 2.13
EDEM1-205ENST00000465187 FKBP4Q02790 459 aaKnown RBP eCLIP28.37■■■□□ 2.13
EDEM1-205ENST00000465187 SOGA3Q5TF21 947 aa28.37■■■□□ 2.13
EDEM1-205ENST00000465187 DPY19L2Q6NUT2 758 aa28.37■■■□□ 2.13
EDEM1-205ENST00000465187 LAS1LQ9Y4W2 734 aaKnown RBP28.37■■■□□ 2.13
EDEM1-205ENST00000465187 RUNDC1Q96C34 613 aa28.36■■■□□ 2.13
EDEM1-205ENST00000465187 NYXQ9GZU5 481 aa28.36■■■□□ 2.13
EDEM1-205ENST00000465187 ZNF541Q9H0D2 1346 aa28.36■■■□□ 2.13
EDEM1-205ENST00000465187 LMOD3Q0VAK6 560 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms