RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
SSBP1-204ENST00000465167 ABCA3Q99758 1704 aa8.37□□□□□ -1.07
SSBP1-204ENST00000465167 EVA1BQ9NVM1 165 aa8.36□□□□□ -1.07
SSBP1-204ENST00000465167 MAP10Q9P2G4 905 aa8.36□□□□□ -1.07
SSBP1-204ENST00000465167 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
SSBP1-204ENST00000465167 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 RALGAPBQ86X10 1494 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 TLL1O43897 1013 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 ADH1BP00325 375 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 TJAP1Q5JTD0 557 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
SSBP1-204ENST00000465167 PMFBP1Q8TBY8 1022 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 ALG2Q9H553 416 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 FKBPLQ9UIM3 349 aa8.35□□□□□ -1.07
SSBP1-204ENST00000465167 SLIT2O94813 1529 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 CTHP32929 405 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-204ENST00000465167 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
SSBP1-204ENST00000465167 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
SSBP1-204ENST00000465167 COL14A1Q05707 1796 aaKnown RBP8.33□□□□□ -1.08
SSBP1-204ENST00000465167 SOX11P35716 441 aa8.33□□□□□ -1.08
SSBP1-204ENST00000465167 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
SSBP1-204ENST00000465167 VPS72Q15906 364 aa8.33□□□□□ -1.08
SSBP1-204ENST00000465167 BRWD3Q6RI45 1802 aa8.33□□□□□ -1.08
SSBP1-204ENST00000465167 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
SSBP1-204ENST00000465167 TRPM3Q9HCF6 1732 aaPredicted RBP8.32□□□□□ -1.08
SSBP1-204ENST00000465167 GLI3P10071 1580 aa8.32□□□□□ -1.08
SSBP1-204ENST00000465167 BLMP54132 1417 aaPredicted RBP8.32□□□□□ -1.08
SSBP1-204ENST00000465167 WASLO00401 505 aaPredicted RBP8.32□□□□□ -1.08
SSBP1-204ENST00000465167 NR1H3Q13133 447 aa8.32□□□□□ -1.08
SSBP1-204ENST00000465167 PCGF6Q9BYE7 350 aa8.32□□□□□ -1.08
SSBP1-204ENST00000465167 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
SSBP1-204ENST00000465167 KIAA1210Q9ULL0 1709 aa8.32□□□□□ -1.08
SSBP1-204ENST00000465167 FBXO45P0C2W1 286 aa8.31□□□□□ -1.08
SSBP1-204ENST00000465167 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
SSBP1-204ENST00000465167 ATP7BP35670 1465 aa8.31□□□□□ -1.08
SSBP1-204ENST00000465167 NRAPQ86VF7 1730 aa8.3□□□□□ -1.08
SSBP1-204ENST00000465167 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
SSBP1-204ENST00000465167 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
SSBP1-204ENST00000465167 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
SSBP1-204ENST00000465167 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
SSBP1-204ENST00000465167 BAG6P46379 1132 aa8.29□□□□□ -1.08
SSBP1-204ENST00000465167 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.08
SSBP1-204ENST00000465167 SEMA3FQ13275 785 aa8.29□□□□□ -1.08
SSBP1-204ENST00000465167 ARMC2Q8NEN0 867 aa8.29□□□□□ -1.08
SSBP1-204ENST00000465167 BTG4Q9NY30 223 aa8.29□□□□□ -1.08
SSBP1-204ENST00000465167 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
SSBP1-204ENST00000465167 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
SSBP1-204ENST00000465167 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
SSBP1-204ENST00000465167 GPKOWQ92917 476 aaPredicted RBP eCLIP8.28□□□□□ -1.085e-7■■■■■ 43.5
SSBP1-204ENST00000465167 NUDT16Q96DE0 195 aaKnown RBP8.28□□□□□ -1.08
SSBP1-204ENST00000465167 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
SSBP1-204ENST00000465167 PHRF1Q9P1Y6 1649 aaKnown RBP8.28□□□□□ -1.08
SSBP1-204ENST00000465167 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.08
SSBP1-204ENST00000465167 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 EVA1CP58658 441 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 SRPK2P78362 688 aaKnown RBP8.27□□□□□ -1.09
SSBP1-204ENST00000465167 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-204ENST00000465167 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 CDK19Q9BWU1 502 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
SSBP1-204ENST00000465167 PTK2Q05397 1052 aa8.26□□□□□ -1.09
SSBP1-204ENST00000465167 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
SSBP1-204ENST00000465167 STRN4Q9NRL3 753 aa8.26□□□□□ -1.09
SSBP1-204ENST00000465167 S1PR4O95977 384 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 NBPF14Q5TI25 921 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 OCSTAMPQ9BR26 566 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 ACEP12821 1306 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 SPATA31A5Q5VU36 1347 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 SPATA31A7Q8IWB4 1347 aa8.25□□□□□ -1.09
SSBP1-204ENST00000465167 CENPJQ9HC77 1338 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-204ENST00000465167 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-204ENST00000465167 KIAA0232Q92628 1395 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 PPIP5K1Q6PFW1 1433 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-204ENST00000465167 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
SSBP1-204ENST00000465167 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-204ENST00000465167 CHRNA2Q15822 529 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
SSBP1-204ENST00000465167 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
SSBP1-204ENST00000465167 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 RFX1P22670 979 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 NBPF8Q3BBV2 869 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 NLRP13Q86W25 1043 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 USP35Q9P2H5 1018 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 THSD7AQ9UPZ6 1657 aa8.23□□□□□ -1.09
SSBP1-204ENST00000465167 EVC2Q86UK5 1308 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms