RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 MTFR1Q15390 333 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 EFCAB2Q5VUJ9 269 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 ATP10AO60312 1499 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 PTPRTO14522 1441 aa9.63□□□□□ -0.87
NUP188-202ENST00000464729 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
NUP188-202ENST00000464729 SERTAD1Q9UHV2 236 aa9.62□□□□□ -0.87
NUP188-202ENST00000464729 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
NUP188-202ENST00000464729 NUP153P49790 1475 aaKnown RBP9.61□□□□□ -0.87
NUP188-202ENST00000464729 ZNF295-AS1Q8N0V1 137 aa9.61□□□□□ -0.87
NUP188-202ENST00000464729 IQSEC3Q9UPP2 1182 aaPredicted RBP9.61□□□□□ -0.87
NUP188-202ENST00000464729 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
NUP188-202ENST00000464729 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
NUP188-202ENST00000464729 PLCH2O75038 1416 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 A6NJY4 79 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 THBS1P07996 1170 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 TRIM50Q86XT4 487 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 GTPBP3Q969Y2 492 aaKnown RBP9.6□□□□□ -0.87
NUP188-202ENST00000464729 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
NUP188-202ENST00000464729 GPAMQ9HCL2 828 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 ZNF358Q9NW07 568 aa9.6□□□□□ -0.87
NUP188-202ENST00000464729 RICTORQ6R327 1708 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 TTC37Q6PGP7 1564 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 GPR25O00155 361 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 PSME1Q06323 249 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 FOXR1Q6PIV2 292 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 ZMYM4Q5VZL5 1548 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 RAPGEF6Q8TEU7 1601 aa9.59□□□□□ -0.87
NUP188-202ENST00000464729 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 SETD1BQ9UPS6 1966 aaKnown RBP9.58□□□□□ -0.88
NUP188-202ENST00000464729 UBAP1LF5GYI3 381 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 CDK2AP1O14519 115 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 BACH1O14867 736 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 MSX1P28360 303 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 PLA2G4AP47712 749 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 CLDN10P78369 228 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
NUP188-202ENST00000464729 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
NUP188-202ENST00000464729 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
NUP188-202ENST00000464729 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
NUP188-202ENST00000464729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.57□□□□□ -0.88
NUP188-202ENST00000464729 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
NUP188-202ENST00000464729 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
NUP188-202ENST00000464729 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
NUP188-202ENST00000464729 SRSF11Q05519 484 aaKnown RBP9.57□□□□□ -0.88
NUP188-202ENST00000464729 LBRQ14739 615 aaKnown RBP9.57□□□□□ -0.88
NUP188-202ENST00000464729 CALR3Q96L12 384 aaKnown RBP9.57□□□□□ -0.88
NUP188-202ENST00000464729 MAFBQ9Y5Q3 323 aaPredicted RBP9.57□□□□□ -0.88
NUP188-202ENST00000464729 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
NUP188-202ENST00000464729 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
NUP188-202ENST00000464729 ADAMTS2O95450 1211 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 EPHA4P54764 986 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
NUP188-202ENST00000464729 TRERF1Q96PN7 1200 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
NUP188-202ENST00000464729 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
NUP188-202ENST00000464729 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
NUP188-202ENST00000464729 CDK11AQ9UQ88 783 aaPredicted RBP9.56□□□□□ -0.88
NUP188-202ENST00000464729 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
NUP188-202ENST00000464729 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 PALM3A6NDB9 673 aaPredicted RBP9.55□□□□□ -0.88
NUP188-202ENST00000464729 ATP4AP20648 1035 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 ZNF385CQ66K41 422 aaPredicted RBP9.55□□□□□ -0.88
NUP188-202ENST00000464729 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 DNAAF2Q9NVR5 837 aaKnown RBP9.55□□□□□ -0.88
NUP188-202ENST00000464729 SIGLEC1Q9BZZ2 1709 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
NUP188-202ENST00000464729 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 FOXK2Q01167 660 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 CCDC102BQ68D86 513 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 SIX5Q8N196 739 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 PGBD3Q8N328 593 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 LARGE2Q8N3Y3 721 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 C1orf216Q8TAB5 229 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 PPP1R12CQ9BZL4 782 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
NUP188-202ENST00000464729 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
NUP188-202ENST00000464729 DKK1O94907 266 aa9.52□□□□□ -0.89
NUP188-202ENST00000464729 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
NUP188-202ENST00000464729 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
NUP188-202ENST00000464729 CABP1Q9NZU7 370 aa9.52□□□□□ -0.89
NUP188-202ENST00000464729 ZNF335Q9H4Z2 1342 aaPredicted RBP9.52□□□□□ -0.89
NUP188-202ENST00000464729 M0R2N6 131 aa9.51□□□□□ -0.89
NUP188-202ENST00000464729 NBPF1Q3BBV0 1214 aa9.51□□□□□ -0.89
NUP188-202ENST00000464729 TNS4Q8IZW8 715 aa9.51□□□□□ -0.89
NUP188-202ENST00000464729 SVOPQ8N4V2 548 aa9.51□□□□□ -0.89
NUP188-202ENST00000464729 ZDHHC1Q8WTX9 485 aa9.51□□□□□ -0.89
NUP188-202ENST00000464729 AIDAQ96BJ3 306 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms