RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 TEFQ10587 303 aa10.38□□□□□ -0.75
ACTB-208ENST00000464611 ZNF772Q68DY9 489 aaPredicted RBP10.38□□□□□ -0.75
ACTB-208ENST00000464611 G2E3Q7L622 706 aa10.38□□□□□ -0.75
ACTB-208ENST00000464611 ERC1Q8IUD2 1116 aa10.38□□□□□ -0.75
ACTB-208ENST00000464611 KIF1BPQ96EK5 621 aa10.38□□□□□ -0.75
ACTB-208ENST00000464611 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
ACTB-208ENST00000464611 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
ACTB-208ENST00000464611 USP21Q9UK80 565 aa10.38□□□□□ -0.75
ACTB-208ENST00000464611 BCL9LQ86UU0 1499 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 EVA1CP58658 441 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 MTX1Q13505 466 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 KLHL40Q2TBA0 621 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 C1orf141Q5JVX7 400 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 UNC5CLQ8IV45 518 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
ACTB-208ENST00000464611 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 ANKRD24Q8TF21 1146 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 USP44Q9H0E7 712 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
ACTB-208ENST00000464611 ATRNO75882 1429 aa10.36□□□□□ -0.75
ACTB-208ENST00000464611 ANP32BQ92688 251 aaKnown RBP10.36□□□□□ -0.75
ACTB-208ENST00000464611 ESYT1Q9BSJ8 1104 aa10.36□□□□□ -0.75
ACTB-208ENST00000464611 STRN4Q9NRL3 753 aa10.36□□□□□ -0.75
ACTB-208ENST00000464611 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
ACTB-208ENST00000464611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
ACTB-208ENST00000464611 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
ACTB-208ENST00000464611 TTC41PQ6P2S7 1318 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 RGPD2P0DJD1 1756 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 F6X3S4 739 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
ACTB-208ENST00000464611 VPS72Q15906 364 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 RUFY2Q8WXA3 655 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 GPATCH3Q96I76 525 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 GLI3P10071 1580 aa10.35□□□□□ -0.75
ACTB-208ENST00000464611 USP42Q9H9J4 1324 aaKnown RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 HIP1O00291 1037 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 CHMLP26374 656 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 LTV1Q96GA3 475 aaPredicted RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 GRPEL1Q9HAV7 217 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 BRPF3Q9ULD4 1205 aa10.34□□□□□ -0.75
ACTB-208ENST00000464611 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 LRRFIP2Q9Y608 721 aaKnown RBP10.34□□□□□ -0.75
ACTB-208ENST00000464611 ZBTB22O15209 634 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
ACTB-208ENST00000464611 BAG4O95429 457 aaKnown RBP10.33□□□□□ -0.76
ACTB-208ENST00000464611 XRCC6P12956 609 aaKnown RBP eCLIP10.33□□□□□ -0.76
ACTB-208ENST00000464611 CUL4AQ13619 759 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 BEND3Q5T5X7 828 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 NBPF6Q5VWK0 638 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 ZNF530Q6P9A1 599 aaPredicted RBP10.33□□□□□ -0.76
ACTB-208ENST00000464611 NBPF4Q96M43 638 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 EXOC6BQ9Y2D4 811 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 THSD7AQ9UPZ6 1657 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 KDM3BQ7LBC6 1761 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 PKD1L3Q7Z443 1732 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 SPATA31A5Q5VU36 1347 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 SPATA31A7Q8IWB4 1347 aa10.33□□□□□ -0.76
ACTB-208ENST00000464611 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 SURF6O75683 361 aaKnown RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 GLRX3O76003 335 aaKnown RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 MBD3O95983 291 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 KIAA1211Q6ZU35 1233 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 RHPN1Q8TCX5 695 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 DDX49Q9Y6V7 483 aaKnown RBP10.32□□□□□ -0.76
ACTB-208ENST00000464611 SPATA31A1Q5TZJ5 1347 aa10.32□□□□□ -0.76
ACTB-208ENST00000464611 PNMA6EA0A0J9YXQ4 647 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 APBB1O00213 710 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 NEK4P51957 841 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 ZNF445P59923 1031 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 CLASRPQ8N2M8 674 aaKnown RBP10.31□□□□□ -0.76
ACTB-208ENST00000464611 LINS1Q8NG48 757 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 OTUD7AQ8TE49 926 aaPredicted RBP10.31□□□□□ -0.76
ACTB-208ENST00000464611 DISP2A7MBM2 1401 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 TNS2Q63HR2 1409 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 UTYO14607 1347 aa10.31□□□□□ -0.76
ACTB-208ENST00000464611 MEGF6O75095 1541 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 PI4KAP2A4QPH2 592 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
ACTB-208ENST00000464611 CD2BP2O95400 341 aaKnown RBP10.3□□□□□ -0.76
ACTB-208ENST00000464611 HSPA4P34932 840 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 PI4KAP1Q8N8J0 262 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms