RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
PITRM1-209ENST00000464395 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 SASH1O94885 1247 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
PITRM1-209ENST00000464395 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 COL15A1P39059 1388 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 JCADQ9P266 1359 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 MCTP1Q6DN14 999 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
PITRM1-209ENST00000464395 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
PITRM1-209ENST00000464395 PHKG2P15735 406 aa13.34□□□□□ -0.27
PITRM1-209ENST00000464395 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
PITRM1-209ENST00000464395 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
PITRM1-209ENST00000464395 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
PITRM1-209ENST00000464395 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
PITRM1-209ENST00000464395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
PITRM1-209ENST00000464395 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
PITRM1-209ENST00000464395 HSP90AB4PQ58FF6 505 aa13.33□□□□□ -0.28
PITRM1-209ENST00000464395 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
PITRM1-209ENST00000464395 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
PITRM1-209ENST00000464395 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
PITRM1-209ENST00000464395 CPDO75976 1380 aa13.32□□□□□ -0.28
PITRM1-209ENST00000464395 ZBTB7CA1YPR0 619 aa13.32□□□□□ -0.28
PITRM1-209ENST00000464395 GRM8O00222 908 aa13.32□□□□□ -0.28
PITRM1-209ENST00000464395 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
PITRM1-209ENST00000464395 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
PITRM1-209ENST00000464395 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
PITRM1-209ENST00000464395 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
PITRM1-209ENST00000464395 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 UPF3BQ9BZI7 483 aaKnown RBP13.31□□□□□ -0.28
PITRM1-209ENST00000464395 BICC1Q9H694 974 aaKnown RBP13.31□□□□□ -0.28
PITRM1-209ENST00000464395 CYP27B1O15528 508 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
PITRM1-209ENST00000464395 MCCP23508 829 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 PTH1RQ03431 593 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 RUFY3Q7L099 469 aa13.31□□□□□ -0.28
PITRM1-209ENST00000464395 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
PITRM1-209ENST00000464395 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 EAF2Q96CJ1 260 aaPredicted RBP13.3□□□□□ -0.28
PITRM1-209ENST00000464395 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 TMEM63CQ9P1W3 806 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 CLCN1P35523 988 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 ARXQ96QS3 562 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 CASP7P55210 303 aa13.3□□□□□ -0.28
PITRM1-209ENST00000464395 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
PITRM1-209ENST00000464395 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
PITRM1-209ENST00000464395 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
PITRM1-209ENST00000464395 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
PITRM1-209ENST00000464395 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
PITRM1-209ENST00000464395 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
PITRM1-209ENST00000464395 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
PITRM1-209ENST00000464395 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
PITRM1-209ENST00000464395 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
PITRM1-209ENST00000464395 GCKRQ14397 625 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 METTL22Q9BUU2 404 aaPredicted RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 RBSNQ9H1K0 784 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 AK2P54819 239 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 LARGE1O95461 756 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
PITRM1-209ENST00000464395 SPG7Q9UQ90 795 aa13.28□□□□□ -0.28
PITRM1-209ENST00000464395 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.28
PITRM1-209ENST00000464395 TM6SF1Q9BZW5 370 aa13.27□□□□□ -0.28
PITRM1-209ENST00000464395 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.28
PITRM1-209ENST00000464395 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.29
PITRM1-209ENST00000464395 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
PITRM1-209ENST00000464395 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
PITRM1-209ENST00000464395 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
PITRM1-209ENST00000464395 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
PITRM1-209ENST00000464395 MAP4K1Q92918 833 aa13.26□□□□□ -0.29
PITRM1-209ENST00000464395 EVI5LQ96CN4 794 aa13.26□□□□□ -0.29
PITRM1-209ENST00000464395 DDX60Q8IY21 1712 aaKnown RBP13.26□□□□□ -0.29
PITRM1-209ENST00000464395 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
PITRM1-209ENST00000464395 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
PITRM1-209ENST00000464395 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
PITRM1-209ENST00000464395 DCAF5Q96JK2 942 aa13.25□□□□□ -0.29
PITRM1-209ENST00000464395 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
PITRM1-209ENST00000464395 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
PITRM1-209ENST00000464395 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
PITRM1-209ENST00000464395 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms