RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
PTPN12-210ENST00000464313 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
PTPN12-210ENST00000464313 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
PTPN12-210ENST00000464313 SOX11P35716 441 aa8□□□□□ -1.13
PTPN12-210ENST00000464313 UCN2Q96RP3 112 aa8□□□□□ -1.13
PTPN12-210ENST00000464313 AVENQ9NQS1 362 aaPredicted RBP8□□□□□ -1.13
PTPN12-210ENST00000464313 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
PTPN12-210ENST00000464313 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
PTPN12-210ENST00000464313 NBPF1Q3BBV0 1214 aa7.99□□□□□ -1.13
PTPN12-210ENST00000464313 ZNF468Q5VIY5 522 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-210ENST00000464313 MCTP1Q6DN14 999 aa7.99□□□□□ -1.13
PTPN12-210ENST00000464313 CCDC97Q96F63 343 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-210ENST00000464313 IQSEC3Q9UPP2 1182 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-210ENST00000464313 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
PTPN12-210ENST00000464313 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 APBA3O96018 575 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 FAM157BP0CG42 384 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 YBX3P16989 372 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPN12-210ENST00000464313 TATP17735 454 aaPredicted RBP7.98□□□□□ -1.13
PTPN12-210ENST00000464313 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 CABP1Q9NZU7 370 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 GJA3Q9Y6H8 435 aa7.98□□□□□ -1.13
PTPN12-210ENST00000464313 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
PTPN12-210ENST00000464313 ZDHHC3Q9NYG2 299 aa7.97□□□□□ -1.13
PTPN12-210ENST00000464313 MARK1Q9P0L2 795 aa7.97□□□□□ -1.13
PTPN12-210ENST00000464313 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
PTPN12-210ENST00000464313 A6NJY4 79 aa7.96□□□□□ -1.14
PTPN12-210ENST00000464313 TXKP42681 527 aa7.96□□□□□ -1.14
PTPN12-210ENST00000464313 MTFR1Q15390 333 aa7.96□□□□□ -1.14
PTPN12-210ENST00000464313 SLC4A9Q96Q91 983 aa7.96□□□□□ -1.14
PTPN12-210ENST00000464313 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 EFSO43281 561 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 PAX4O43316 350 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 TXLNAP40222 546 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 SYT9Q86SS6 491 aa7.95□□□□□ -1.14
PTPN12-210ENST00000464313 ELOA3CA0A087WX78 387 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-210ENST00000464313 SPDYE3A6NKU9 549 aa7.94□□□□□ -1.14
PTPN12-210ENST00000464313 ELOA3DA6NLF2 546 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-210ENST00000464313 MAP7D1Q3KQU3 841 aa7.94□□□□□ -1.14
PTPN12-210ENST00000464313 ELOA3BQ3SY89 546 aa7.94□□□□□ -1.14
PTPN12-210ENST00000464313 ELOA3Q8NG57 546 aa7.94□□□□□ -1.14
PTPN12-210ENST00000464313 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
PTPN12-210ENST00000464313 PALM3A6NDB9 673 aaPredicted RBP7.93□□□□□ -1.14
PTPN12-210ENST00000464313 RFX1P22670 979 aa7.93□□□□□ -1.14
PTPN12-210ENST00000464313 CFAP70Q5T0N1 1121 aa7.93□□□□□ -1.14
PTPN12-210ENST00000464313 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
PTPN12-210ENST00000464313 ZDHHC1Q8WTX9 485 aa7.93□□□□□ -1.14
PTPN12-210ENST00000464313 TFIP11Q9UBB9 837 aaKnown RBP7.93□□□□□ -1.14
PTPN12-210ENST00000464313 PCDHGA11Q9Y5H2 935 aa7.93□□□□□ -1.14
PTPN12-210ENST00000464313 H2AFB1P0C5Y9 115 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 H2AFB2P0C5Z0 115 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 SKIP12755 728 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 ALAS2P22557 587 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 LRRC69Q6ZNQ3 347 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 MDFIQ99750 246 aa7.92□□□□□ -1.14
PTPN12-210ENST00000464313 LAMC2Q13753 1193 aa7.91□□□□□ -1.14
PTPN12-210ENST00000464313 MAFBQ9Y5Q3 323 aaPredicted RBP7.91□□□□□ -1.14
PTPN12-210ENST00000464313 M0R082 166 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 ATP9BO43861 1147 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 LMOD1P29536 600 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-210ENST00000464313 SFSWAPQ12872 951 aaKnown RBP7.9□□□□□ -1.14
PTPN12-210ENST00000464313 COL9A3Q14050 684 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-210ENST00000464313 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 NACC1Q96RE7 527 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-210ENST00000464313 SLC30A3Q99726 388 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 KRTAP4-9Q9BYQ8 210 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 STARD13Q9Y3M8 1113 aa7.9□□□□□ -1.14
PTPN12-210ENST00000464313 COL17A1Q9UMD9 1497 aaPredicted RBP7.89□□□□□ -1.15
PTPN12-210ENST00000464313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.89□□□□□ -1.15
PTPN12-210ENST00000464313 USP17L5A8MUK1 530 aa7.89□□□□□ -1.15
PTPN12-210ENST00000464313 TBCELQ5QJ74 424 aa7.89□□□□□ -1.15
PTPN12-210ENST00000464313 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTPN12-210ENST00000464313 L3MBTL2Q969R5 705 aa7.89□□□□□ -1.15
PTPN12-210ENST00000464313 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
PTPN12-210ENST00000464313 SCHIP1Q9P0W5 487 aaPredicted RBP7.89□□□□□ -1.15
PTPN12-210ENST00000464313 ARID1BQ8NFD5 2236 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-210ENST00000464313 SIN3BO75182 1162 aa7.88□□□□□ -1.15
PTPN12-210ENST00000464313 ALBP02768 609 aa7.88□□□□□ -1.15
PTPN12-210ENST00000464313 GRIK4Q16099 956 aa7.88□□□□□ -1.15
PTPN12-210ENST00000464313 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-210ENST00000464313 ZNF358Q9NW07 568 aa7.88□□□□□ -1.15
PTPN12-210ENST00000464313 USP17L3A6NCW0 530 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 USP17L4A6NCW7 530 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 ADARB2-AS1A8MUL3 147 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 CDCA8Q53HL2 280 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 SH3PXD2AQ5TCZ1 1133 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 USP17L2Q6R6M4 530 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 USP17L1Q7RTZ2 530 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
PTPN12-210ENST00000464313 EML1O00423 815 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 BACH1O14867 736 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 NOS2P35228 1153 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 GTF2IP78347 998 aa7.86□□□□□ -1.15
PTPN12-210ENST00000464313 TRIM28Q13263 835 aaKnown RBP7.86□□□□□ -1.15
PTPN12-210ENST00000464313 NCOA4Q13772 614 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms