RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 EPXP11678 715 aa9.04□□□□□ -0.96
ITGB1-208ENST00000464001 ADH6P28332 368 aa9.04□□□□□ -0.96
ITGB1-208ENST00000464001 SEC13P55735 322 aa9.04□□□□□ -0.96
ITGB1-208ENST00000464001 SNRPNP63162 240 aaKnown RBP9.04□□□□□ -0.96
ITGB1-208ENST00000464001 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
ITGB1-208ENST00000464001 EFSO43281 561 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-208ENST00000464001 DKK1O94907 266 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-208ENST00000464001 SH3PXD2AQ5TCZ1 1133 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 C7orf43Q8WVR3 580 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 DCAF5Q96JK2 942 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 BTBD6Q96KE9 485 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 ANKIB1Q9P2G1 1089 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 HCN4Q9Y3Q4 1203 aa9.03□□□□□ -0.96
ITGB1-208ENST00000464001 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 PIK3R2O00459 728 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 GPAT2Q6NUI2 795 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
ITGB1-208ENST00000464001 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-208ENST00000464001 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
ITGB1-208ENST00000464001 PHACTR1Q9C0D0 580 aa9.01□□□□□ -0.97
ITGB1-208ENST00000464001 STRN4Q9NRL3 753 aa9.01□□□□□ -0.97
ITGB1-208ENST00000464001 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
ITGB1-208ENST00000464001 ZNF468Q5VIY5 522 aaPredicted RBP9□□□□□ -0.97
ITGB1-208ENST00000464001 STAG2Q8N3U4 1231 aa9□□□□□ -0.97
ITGB1-208ENST00000464001 HINFPQ9BQA5 517 aa9□□□□□ -0.97
ITGB1-208ENST00000464001 KLF15Q9UIH9 416 aa9□□□□□ -0.97
ITGB1-208ENST00000464001 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
ITGB1-208ENST00000464001 PTK7Q13308 1070 aa8.99□□□□□ -0.97
ITGB1-208ENST00000464001 ALYREFQ86V81 257 aaKnown RBP8.99□□□□□ -0.97
ITGB1-208ENST00000464001 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
ITGB1-208ENST00000464001 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
ITGB1-208ENST00000464001 C21orf2O43822 256 aa8.98□□□□□ -0.97
ITGB1-208ENST00000464001 DPYDQ12882 1025 aa8.98□□□□□ -0.97
ITGB1-208ENST00000464001 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-208ENST00000464001 CHSY3Q70JA7 882 aa8.98□□□□□ -0.97
ITGB1-208ENST00000464001 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
ITGB1-208ENST00000464001 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-208ENST00000464001 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L15C9J2P7 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L13C9JLJ4 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L12C9JPN9 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L11C9JVI0 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L21D6R901 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L18D6R9N7 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L22D6RA61 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L17D6RBQ6 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L19D6RCP7 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L20D6RJB6 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 USP17L24Q0WX57 530 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 HIF1AQ16665 826 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 PLA2G4EQ3MJ16 856 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 LINC00114Q6XXX2 140 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 ALDH16A1Q8IZ83 802 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
ITGB1-208ENST00000464001 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-208ENST00000464001 GNB5O14775 395 aa8.96□□□□□ -0.98
ITGB1-208ENST00000464001 HOXB4P17483 251 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-208ENST00000464001 SFSWAPQ12872 951 aaKnown RBP8.96□□□□□ -0.98
ITGB1-208ENST00000464001 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
ITGB1-208ENST00000464001 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
ITGB1-208ENST00000464001 SUSD3Q96L08 255 aa8.96□□□□□ -0.98
ITGB1-208ENST00000464001 ALAS2P22557 587 aa8.95□□□□□ -0.98
ITGB1-208ENST00000464001 DGKGP49619 791 aa8.95□□□□□ -0.98
ITGB1-208ENST00000464001 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
ITGB1-208ENST00000464001 BRD7Q9NPI1 651 aa8.95□□□□□ -0.98
ITGB1-208ENST00000464001 MSTNO14793 375 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 SIN3BO75182 1162 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 IGFBP4P22692 258 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 GRIN2CQ14957 1233 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 ZNF280CQ8ND82 737 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 NGLY1Q96IV0 654 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 NOP53Q9NZM5 478 aaKnown RBP8.94□□□□□ -0.98
ITGB1-208ENST00000464001 KCNH4Q9UQ05 1017 aa8.94□□□□□ -0.98
ITGB1-208ENST00000464001 ELOA3CA0A087WX78 387 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-208ENST00000464001 ELOA3DA6NLF2 546 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-208ENST00000464001 KCNQ4P56696 695 aa8.93□□□□□ -0.98
ITGB1-208ENST00000464001 SPEM2Q0P670 501 aa8.93□□□□□ -0.98
ITGB1-208ENST00000464001 ELOA3BQ3SY89 546 aa8.93□□□□□ -0.98
ITGB1-208ENST00000464001 ELOA3Q8NG57 546 aa8.93□□□□□ -0.98
ITGB1-208ENST00000464001 COL8A1P27658 744 aa8.92□□□□□ -0.98
ITGB1-208ENST00000464001 TYRO3Q06418 890 aa8.92□□□□□ -0.98
ITGB1-208ENST00000464001 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
ITGB1-208ENST00000464001 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
ITGB1-208ENST00000464001 SUV39H2Q9H5I1 410 aa8.92□□□□□ -0.98
ITGB1-208ENST00000464001 KRBA1A5PL33 1030 aa8.91□□□□□ -0.98
ITGB1-208ENST00000464001 ADARB2-AS1A8MUL3 147 aa8.91□□□□□ -0.98
ITGB1-208ENST00000464001 RTN1Q16799 776 aa8.91□□□□□ -0.98
ITGB1-208ENST00000464001 BTLAQ7Z6A9 289 aa8.91□□□□□ -0.98
ITGB1-208ENST00000464001 LGR5O75473 907 aa8.9□□□□□ -0.98
ITGB1-208ENST00000464001 RFX1P22670 979 aa8.9□□□□□ -0.98
ITGB1-208ENST00000464001 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
ITGB1-208ENST00000464001 TNFRSF25Q93038 417 aa8.9□□□□□ -0.98
ITGB1-208ENST00000464001 ARXQ96QS3 562 aa8.9□□□□□ -0.98
ITGB1-208ENST00000464001 SPOCK3Q9BQ16 436 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms