RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 PRPF40BQ6NWY9 871 aaKnown RBP13.74□□□□□ -0.21
TMEM54-203ENST00000463914 SETDB2Q96T68 719 aa13.74□□□□□ -0.21
TMEM54-203ENST00000463914 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
TMEM54-203ENST00000463914 USP16Q9Y5T5 823 aa13.74□□□□□ -0.21
TMEM54-203ENST00000463914 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
TMEM54-203ENST00000463914 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
TMEM54-203ENST00000463914 SRGNP10124 158 aa13.73□□□□□ -0.21
TMEM54-203ENST00000463914 ST5P78524 1137 aa13.73□□□□□ -0.21
TMEM54-203ENST00000463914 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
TMEM54-203ENST00000463914 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
TMEM54-203ENST00000463914 CAPN15O75808 1086 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 MCM10Q7L590 875 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
TMEM54-203ENST00000463914 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
TMEM54-203ENST00000463914 DDNO94850 711 aaPredicted RBP13.71□□□□□ -0.21
TMEM54-203ENST00000463914 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
TMEM54-203ENST00000463914 MASTLQ96GX5 879 aa13.71□□□□□ -0.21
TMEM54-203ENST00000463914 SCN4AP35499 1836 aa13.7□□□□□ -0.22
TMEM54-203ENST00000463914 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
TMEM54-203ENST00000463914 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM54-203ENST00000463914 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
TMEM54-203ENST00000463914 TNS4Q8IZW8 715 aa13.7□□□□□ -0.22
TMEM54-203ENST00000463914 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
TMEM54-203ENST00000463914 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
TMEM54-203ENST00000463914 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
TMEM54-203ENST00000463914 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
TMEM54-203ENST00000463914 NBPF10Q6P3W6 841 aaKnown RBP13.69□□□□□ -0.22
TMEM54-203ENST00000463914 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
TMEM54-203ENST00000463914 NBPF15Q8N660 670 aa13.69□□□□□ -0.22
TMEM54-203ENST00000463914 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
TMEM54-203ENST00000463914 ZNF541Q9H0D2 1346 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
TMEM54-203ENST00000463914 MKRN1Q9UHC7 482 aaKnown RBP13.68□□□□□ -0.22
TMEM54-203ENST00000463914 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM54-203ENST00000463914 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
TMEM54-203ENST00000463914 NUP98P52948 1817 aa13.67□□□□□ -0.22
TMEM54-203ENST00000463914 NPR1P16066 1061 aa13.67□□□□□ -0.22
TMEM54-203ENST00000463914 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
TMEM54-203ENST00000463914 ADAMTSL1Q8N6G6 1762 aa13.67□□□□□ -0.22
TMEM54-203ENST00000463914 HLFQ16534 295 aa13.66□□□□□ -0.22
TMEM54-203ENST00000463914 ZNF277Q9NRM2 450 aaPredicted RBP13.66□□□□□ -0.22
TMEM54-203ENST00000463914 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
TMEM54-203ENST00000463914 KLRG2A4D1S0 409 aaPredicted RBP13.65□□□□□ -0.22
TMEM54-203ENST00000463914 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM54-203ENST00000463914 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
TMEM54-203ENST00000463914 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
TMEM54-203ENST00000463914 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
TMEM54-203ENST00000463914 COL4A5P29400 1685 aa13.65□□□□□ -0.22
TMEM54-203ENST00000463914 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
TMEM54-203ENST00000463914 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
TMEM54-203ENST00000463914 IQCA1LA6NCM1 817 aa13.64□□□□□ -0.23
TMEM54-203ENST00000463914 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
TMEM54-203ENST00000463914 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
TMEM54-203ENST00000463914 TPTE2Q6XPS3 522 aa13.63□□□□□ -0.23
TMEM54-203ENST00000463914 RNF123Q5XPI4 1314 aa13.63□□□□□ -0.23
TMEM54-203ENST00000463914 LTBP1Q14766 1721 aa13.62□□□□□ -0.23
TMEM54-203ENST00000463914 RGL2O15211 777 aa13.62□□□□□ -0.23
TMEM54-203ENST00000463914 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
TMEM54-203ENST00000463914 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
TMEM54-203ENST00000463914 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
TMEM54-203ENST00000463914 SLC51AQ86UW1 340 aa13.62□□□□□ -0.23
TMEM54-203ENST00000463914 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
TMEM54-203ENST00000463914 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
TMEM54-203ENST00000463914 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
TMEM54-203ENST00000463914 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
TMEM54-203ENST00000463914 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
TMEM54-203ENST00000463914 FOXN1O15353 648 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 GPTP24298 496 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 EPHX2P34913 555 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 HACL1Q9UJ83 578 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 MAP3K15Q6ZN16 1313 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 UBN2Q6ZU65 1347 aa13.6□□□□□ -0.23
TMEM54-203ENST00000463914 PCNTO95613 3336 aa13.59□□□□□ -0.23
TMEM54-203ENST00000463914 FZD9O00144 591 aa13.59□□□□□ -0.23
TMEM54-203ENST00000463914 ITGBL1O95965 494 aaPredicted RBP13.59□□□□□ -0.23
TMEM54-203ENST00000463914 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
TMEM54-203ENST00000463914 TMEM88BA6NKF7 163 aa13.58□□□□□ -0.24
TMEM54-203ENST00000463914 VEGFBP49765 207 aa13.58□□□□□ -0.24
TMEM54-203ENST00000463914 EIF4A1P60842 406 aaKnown RBP13.58□□□□□ -0.24
TMEM54-203ENST00000463914 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
TMEM54-203ENST00000463914 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
TMEM54-203ENST00000463914 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
TMEM54-203ENST00000463914 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
TMEM54-203ENST00000463914 ERVV-1B6SEH8 477 aa13.57□□□□□ -0.24
TMEM54-203ENST00000463914 MYL6BP14649 208 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms