RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 HLFQ16534 295 aa24.41■■□□□ 1.5
LMNB1-204ENST00000463908 XAGE3Q8WTP9 111 aa24.41■■□□□ 1.5
LMNB1-204ENST00000463908 PHAXQ9H814 394 aaKnown RBP24.4■■□□□ 1.5
LMNB1-204ENST00000463908 HYPKQ9NX55 129 aa24.4■■□□□ 1.5
LMNB1-204ENST00000463908 MMP10P09238 476 aa24.39■■□□□ 1.49
LMNB1-204ENST00000463908 POLD1P28340 1107 aa24.39■■□□□ 1.49
LMNB1-204ENST00000463908 AIMP1Q12904 312 aaKnown RBP24.39■■□□□ 1.49
LMNB1-204ENST00000463908 CHMP4AQ9BY43 222 aa24.39■■□□□ 1.49
LMNB1-204ENST00000463908 MAP3K15Q6ZN16 1313 aa24.38■■□□□ 1.49
LMNB1-204ENST00000463908 ERVV-1B6SEH8 477 aa24.38■■□□□ 1.49
LMNB1-204ENST00000463908 NFIXQ14938 502 aa24.38■■□□□ 1.49
LMNB1-204ENST00000463908 TBC1D9BQ66K14 1250 aa24.38■■□□□ 1.49
LMNB1-204ENST00000463908 DDR1Q08345 913 aa24.37■■□□□ 1.49
LMNB1-204ENST00000463908 CLEC4GQ6UXB4 293 aa24.37■■□□□ 1.49
LMNB1-204ENST00000463908 ZBTB3Q9H5J0 574 aa24.37■■□□□ 1.49
LMNB1-204ENST00000463908 CHD4Q14839 1912 aa24.37■■□□□ 1.49
LMNB1-204ENST00000463908 SLC4A2P04920 1241 aa24.36■■□□□ 1.49
LMNB1-204ENST00000463908 KIF6Q6ZMV9 814 aa24.36■■□□□ 1.49
LMNB1-204ENST00000463908 G2E3Q7L622 706 aa24.36■■□□□ 1.49
LMNB1-204ENST00000463908 RGL2O15211 777 aa24.35■■□□□ 1.49
LMNB1-204ENST00000463908 BICDL1Q6ZP65 573 aa24.35■■□□□ 1.49
LMNB1-204ENST00000463908 POLRMTO00411 1230 aaKnown RBP24.34■■□□□ 1.49
LMNB1-204ENST00000463908 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
LMNB1-204ENST00000463908 ANKRD13DQ6ZTN6 518 aa24.33■■□□□ 1.49
LMNB1-204ENST00000463908 SCN7AQ01118 1682 aa24.32■■□□□ 1.48
LMNB1-204ENST00000463908 GIGYF2Q6Y7W6 1299 aaKnown RBP24.32■■□□□ 1.48
LMNB1-204ENST00000463908 PARP3Q9Y6F1 533 aa24.32■■□□□ 1.48
LMNB1-204ENST00000463908 DCAF8L1A6NGE4 600 aa24.31■■□□□ 1.48
LMNB1-204ENST00000463908 PLBD2Q8NHP8 589 aa24.31■■□□□ 1.48
LMNB1-204ENST00000463908 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
LMNB1-204ENST00000463908 BCORQ6W2J9 1755 aa24.31■■□□□ 1.48
LMNB1-204ENST00000463908 ZNF34Q8IZ26 560 aa24.3■■□□□ 1.48
LMNB1-204ENST00000463908 SETDB2Q96T68 719 aa24.3■■□□□ 1.48
LMNB1-204ENST00000463908 SERPINB2P05120 415 aa24.29■■□□□ 1.48
LMNB1-204ENST00000463908 SSH1Q8WYL5 1049 aa24.29■■□□□ 1.48
LMNB1-204ENST00000463908 NIP7Q9Y221 180 aaKnown RBP eCLIP24.29■■□□□ 1.48
LMNB1-204ENST00000463908 CT47B1P0C2W7 299 aaPredicted RBP24.28■■□□□ 1.48
LMNB1-204ENST00000463908 MRPL50Q8N5N7 158 aaKnown RBP24.28■■□□□ 1.48
LMNB1-204ENST00000463908 FHDC1Q9C0D6 1143 aaPredicted RBP24.28■■□□□ 1.48
LMNB1-204ENST00000463908 TCIRG1Q13488 830 aa24.27■■□□□ 1.48
LMNB1-204ENST00000463908 ZNF428Q96B54 188 aa24.27■■□□□ 1.48
LMNB1-204ENST00000463908 GPTP24298 496 aa24.26■■□□□ 1.47
LMNB1-204ENST00000463908 FLIIQ13045 1269 aa24.26■■□□□ 1.47
LMNB1-204ENST00000463908 RIC3Q7Z5B4 369 aa24.26■■□□□ 1.47
LMNB1-204ENST00000463908 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
LMNB1-204ENST00000463908 SYT17Q9BSW7 474 aa24.26■■□□□ 1.47
LMNB1-204ENST00000463908 ATP10DQ9P241 1426 aa24.26■■□□□ 1.47
LMNB1-204ENST00000463908 KSR2Q6VAB6 950 aa24.25■■□□□ 1.47
LMNB1-204ENST00000463908 NUP98P52948 1817 aa24.25■■□□□ 1.47
LMNB1-204ENST00000463908 UBN2Q6ZU65 1347 aa24.25■■□□□ 1.47
LMNB1-204ENST00000463908 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
LMNB1-204ENST00000463908 ALDH1L2Q3SY69 923 aa24.24■■□□□ 1.47
LMNB1-204ENST00000463908 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
LMNB1-204ENST00000463908 CD2APQ9Y5K6 639 aa24.24■■□□□ 1.47
LMNB1-204ENST00000463908 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
LMNB1-204ENST00000463908 DDX58O95786 925 aaKnown RBP24.23■■□□□ 1.47
LMNB1-204ENST00000463908 RARSP54136 660 aaKnown RBP24.23■■□□□ 1.47
LMNB1-204ENST00000463908 SUSD4Q5VX71 490 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 CCDC24Q8N4L8 307 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 ISCA1Q9BUE6 129 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 BCL2L13Q9BXK5 485 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 MAP3K2Q9Y2U5 619 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 ADCY9O60503 1353 aa24.23■■□□□ 1.47
LMNB1-204ENST00000463908 FAM177BA6PVY3 158 aa24.22■■□□□ 1.47
LMNB1-204ENST00000463908 ATP5J2-PTCD1G3V325 749 aa24.22■■□□□ 1.47
LMNB1-204ENST00000463908 HSP90AB3PQ58FF7 597 aa24.22■■□□□ 1.47
LMNB1-204ENST00000463908 PRR5LQ6MZQ0 368 aa24.22■■□□□ 1.47
LMNB1-204ENST00000463908 KLHL34Q8N239 644 aa24.22■■□□□ 1.47
LMNB1-204ENST00000463908 METTL22Q9BUU2 404 aaPredicted RBP24.22■■□□□ 1.47
LMNB1-204ENST00000463908 FKBP5Q13451 457 aaPredicted RBP24.21■■□□□ 1.47
LMNB1-204ENST00000463908 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
LMNB1-204ENST00000463908 NBPF5PQ86XG9 351 aaPredicted RBP24.21■■□□□ 1.47
LMNB1-204ENST00000463908 NLGN2Q8NFZ4 835 aa24.21■■□□□ 1.47
LMNB1-204ENST00000463908 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
LMNB1-204ENST00000463908 TPTE2Q6XPS3 522 aa24.2■■□□□ 1.46
LMNB1-204ENST00000463908 MYD88Q99836 296 aa24.2■■□□□ 1.46
LMNB1-204ENST00000463908 NRXN2Q9P2S2 1712 aa24.2■■□□□ 1.46
LMNB1-204ENST00000463908 C10orf71Q711Q0 1435 aa24.19■■□□□ 1.46
LMNB1-204ENST00000463908 AFDNP55196 1824 aaKnown RBP24.19■■□□□ 1.46
LMNB1-204ENST00000463908 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
LMNB1-204ENST00000463908 PARP10Q53GL7 1025 aa24.18■■□□□ 1.46
LMNB1-204ENST00000463908 CNBD1Q8NA66 436 aa24.18■■□□□ 1.46
LMNB1-204ENST00000463908 SMC4Q9NTJ3 1288 aa24.18■■□□□ 1.46
LMNB1-204ENST00000463908 CACNA1FO60840 1977 aa24.17■■□□□ 1.46
LMNB1-204ENST00000463908 F6X3S4 739 aa24.17■■□□□ 1.46
LMNB1-204ENST00000463908 NTSR2O95665 410 aa24.17■■□□□ 1.46
LMNB1-204ENST00000463908 IGKV5-2P06315 115 aa24.17■■□□□ 1.46
LMNB1-204ENST00000463908 BCAR3O75815 825 aa24.16■■□□□ 1.46
LMNB1-204ENST00000463908 ERFEQ4G0M1 354 aa24.16■■□□□ 1.46
LMNB1-204ENST00000463908 NUTM1Q86Y26 1132 aa24.16■■□□□ 1.46
LMNB1-204ENST00000463908 DNAAF4Q8WXU2 420 aa24.16■■□□□ 1.46
LMNB1-204ENST00000463908 UTP14AQ9BVJ6 771 aaKnown RBP24.16■■□□□ 1.46
LMNB1-204ENST00000463908 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
LMNB1-204ENST00000463908 TGFB2P61812 414 aa24.15■■□□□ 1.46
LMNB1-204ENST00000463908 PPP1R42Q7Z4L9 355 aa24.15■■□□□ 1.46
LMNB1-204ENST00000463908 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
LMNB1-204ENST00000463908 BRIP1Q9BX63 1249 aa24.15■■□□□ 1.46
LMNB1-204ENST00000463908 NYXQ9GZU5 481 aa24.15■■□□□ 1.46
LMNB1-204ENST00000463908 A0A0G2JLW4 131 aa24.14■■□□□ 1.45
LMNB1-204ENST00000463908 KCNA3P22001 575 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms