RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 PRELPP51888 382 aa24.82■■□□□ 1.56
SF3A1-205ENST00000463818 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 C21orf2O43822 256 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 TOMM70O94826 608 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 SRGNP10124 158 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 TPTE2Q6XPS3 522 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 TSPYL4Q9UJ04 414 aa24.81■■□□□ 1.56
SF3A1-205ENST00000463818 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
SF3A1-205ENST00000463818 NFKBIEO00221 500 aa24.8■■□□□ 1.56
SF3A1-205ENST00000463818 STYK1Q6J9G0 422 aa24.8■■□□□ 1.56
SF3A1-205ENST00000463818 CNKSR1Q969H4 720 aa24.8■■□□□ 1.56
SF3A1-205ENST00000463818 KDM2BQ8NHM5 1336 aa24.8■■□□□ 1.56
SF3A1-205ENST00000463818 MYL6BP14649 208 aa24.79■■□□□ 1.56
SF3A1-205ENST00000463818 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
SF3A1-205ENST00000463818 MASTLQ96GX5 879 aa24.79■■□□□ 1.56
SF3A1-205ENST00000463818 ERVV-1B6SEH8 477 aa24.78■■□□□ 1.56
SF3A1-205ENST00000463818 LMOD3Q0VAK6 560 aa24.78■■□□□ 1.56
SF3A1-205ENST00000463818 NEUROD2Q15784 382 aa24.78■■□□□ 1.56
SF3A1-205ENST00000463818 TTLL7Q6ZT98 887 aa24.78■■□□□ 1.56
SF3A1-205ENST00000463818 RRAGCQ9HB90 399 aa24.78■■□□□ 1.56
SF3A1-205ENST00000463818 BABAM1Q9NWV8 329 aa24.77■■□□□ 1.56
SF3A1-205ENST00000463818 DLG5Q8TDM6 1919 aa24.76■■□□□ 1.55
SF3A1-205ENST00000463818 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SF3A1-205ENST00000463818 ADAMTS8Q9UP79 889 aa24.76■■□□□ 1.55
SF3A1-205ENST00000463818 KLRG2A4D1S0 409 aaPredicted RBP24.75■■□□□ 1.55
SF3A1-205ENST00000463818 GTF2E1P29083 439 aaPredicted RBP24.75■■□□□ 1.55
SF3A1-205ENST00000463818 PRPF40BQ6NWY9 871 aaKnown RBP24.75■■□□□ 1.55
SF3A1-205ENST00000463818 KIF6Q6ZMV9 814 aa24.75■■□□□ 1.55
SF3A1-205ENST00000463818 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
SF3A1-205ENST00000463818 RUNDC1Q96C34 613 aa24.75■■□□□ 1.55
SF3A1-205ENST00000463818 MAP3K15Q6ZN16 1313 aa24.75■■□□□ 1.55
SF3A1-205ENST00000463818 ZC3H4Q9UPT8 1303 aaKnown RBP24.75■■□□□ 1.55
SF3A1-205ENST00000463818 NPR1P16066 1061 aa24.74■■□□□ 1.55
SF3A1-205ENST00000463818 EIF2S2P20042 333 aaKnown RBP24.74■■□□□ 1.55
SF3A1-205ENST00000463818 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
SF3A1-205ENST00000463818 ANKRD31Q8N7Z5 1873 aa24.73■■□□□ 1.55
SF3A1-205ENST00000463818 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
SF3A1-205ENST00000463818 RBM46Q8TBY0 533 aaKnown RBP24.73■■□□□ 1.55
SF3A1-205ENST00000463818 BCORQ6W2J9 1755 aa24.72■■□□□ 1.55
SF3A1-205ENST00000463818 ERBB4Q15303 1308 aa24.72■■□□□ 1.55
SF3A1-205ENST00000463818 ZBTB3Q9H5J0 574 aa24.72■■□□□ 1.55
SF3A1-205ENST00000463818 DLEC1Q9Y238 1755 aa24.72■■□□□ 1.55
SF3A1-205ENST00000463818 PDIA6Q15084 440 aa24.71■■□□□ 1.55
SF3A1-205ENST00000463818 C7orf43Q8WVR3 580 aa24.71■■□□□ 1.55
SF3A1-205ENST00000463818 TRIM35Q9UPQ4 493 aa24.71■■□□□ 1.55
SF3A1-205ENST00000463818 KDM3BQ7LBC6 1761 aa24.71■■□□□ 1.55
SF3A1-205ENST00000463818 GPTP24298 496 aa24.7■■□□□ 1.54
SF3A1-205ENST00000463818 SOGA3Q5TF21 947 aa24.7■■□□□ 1.54
SF3A1-205ENST00000463818 NYXQ9GZU5 481 aa24.7■■□□□ 1.54
SF3A1-205ENST00000463818 TAOK3Q9H2K8 898 aa24.7■■□□□ 1.54
SF3A1-205ENST00000463818 SBF1O95248 1867 aa24.7■■□□□ 1.54
SF3A1-205ENST00000463818 CHL1O00533 1208 aa24.69■■□□□ 1.54
SF3A1-205ENST00000463818 ERFEQ4G0M1 354 aa24.69■■□□□ 1.54
SF3A1-205ENST00000463818 NUTM1Q86Y26 1132 aa24.69■■□□□ 1.54
SF3A1-205ENST00000463818 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
SF3A1-205ENST00000463818 LTBP3Q9NS15 1303 aa24.68■■□□□ 1.54
SF3A1-205ENST00000463818 DPY19L2Q6NUT2 758 aa24.68■■□□□ 1.54
SF3A1-205ENST00000463818 GIGYF2Q6Y7W6 1299 aaKnown RBP24.68■■□□□ 1.54
SF3A1-205ENST00000463818 LRP10Q7Z4F1 713 aa24.68■■□□□ 1.54
SF3A1-205ENST00000463818 ANXA1P04083 346 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 APLP1P51693 650 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 PROSER3Q2NL68 480 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 SUSD4Q5VX71 490 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 ZNF34Q8IZ26 560 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 NECTIN2Q92692 538 aa24.67■■□□□ 1.54
SF3A1-205ENST00000463818 VEGFAP15692 232 aaPredicted RBP24.66■■□□□ 1.54
SF3A1-205ENST00000463818 ALDH1B1P30837 517 aa24.66■■□□□ 1.54
SF3A1-205ENST00000463818 COL11A2P13942 1736 aaPredicted RBP24.66■■□□□ 1.54
SF3A1-205ENST00000463818 UBN2Q6ZU65 1347 aa24.65■■□□□ 1.54
SF3A1-205ENST00000463818 FSTL1Q12841 308 aa24.65■■□□□ 1.54
SF3A1-205ENST00000463818 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
SF3A1-205ENST00000463818 LAMB4A4D0S4 1761 aa24.65■■□□□ 1.54
SF3A1-205ENST00000463818 SLX4Q8IY92 1834 aa24.64■■□□□ 1.54
SF3A1-205ENST00000463818 KRT24Q2M2I5 525 aa24.64■■□□□ 1.54
SF3A1-205ENST00000463818 OLFM4Q6UX06 510 aa24.63■■□□□ 1.53
SF3A1-205ENST00000463818 COPS6Q7L5N1 327 aa24.63■■□□□ 1.53
SF3A1-205ENST00000463818 POTECB2RU33 542 aa24.62■■□□□ 1.53
SF3A1-205ENST00000463818 AIMP1Q12904 312 aaKnown RBP24.62■■□□□ 1.53
SF3A1-205ENST00000463818 CRY2Q49AN0 593 aa24.62■■□□□ 1.53
SF3A1-205ENST00000463818 PPP1R42Q7Z4L9 355 aa24.62■■□□□ 1.53
SF3A1-205ENST00000463818 ABCC12Q96J65 1359 aa24.62■■□□□ 1.53
SF3A1-205ENST00000463818 CEP350Q5VT06 3117 aa24.62■■□□□ 1.53
SF3A1-205ENST00000463818 NTSR2O95665 410 aa24.61■■□□□ 1.53
SF3A1-205ENST00000463818 PARP10Q53GL7 1025 aa24.61■■□□□ 1.53
SF3A1-205ENST00000463818 RTKN2Q8IZC4 609 aa24.61■■□□□ 1.53
SF3A1-205ENST00000463818 XAGE3Q8WTP9 111 aa24.61■■□□□ 1.53
SF3A1-205ENST00000463818 FKBP4Q02790 459 aaKnown RBP eCLIP24.6■■□□□ 1.53
SF3A1-205ENST00000463818 SMC1BQ8NDV3 1235 aa24.6■■□□□ 1.53
SF3A1-205ENST00000463818 DDX21Q9NR30 783 aaKnown RBP eCLIP24.6■■□□□ 1.53
SF3A1-205ENST00000463818 APAF1O14727 1248 aa24.59■■□□□ 1.53
SF3A1-205ENST00000463818 RPGRQ92834 1020 aaKnown RBP24.59■■□□□ 1.53
SF3A1-205ENST00000463818 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
SF3A1-205ENST00000463818 ZNF277Q9NRM2 450 aaPredicted RBP24.59■■□□□ 1.53
SF3A1-205ENST00000463818 IBTKQ9P2D0 1353 aaPredicted RBP24.58■■□□□ 1.53
SF3A1-205ENST00000463818 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
SF3A1-205ENST00000463818 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
SF3A1-205ENST00000463818 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
SF3A1-205ENST00000463818 DNAJC5GQ8N7S2 189 aa24.58■■□□□ 1.53
SF3A1-205ENST00000463818 UTP14AQ9BVJ6 771 aaKnown RBP24.58■■□□□ 1.53
SF3A1-205ENST00000463818 SYNE4Q8N205 404 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms