RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 BACH1O14867 736 aa6.15□□□□□ -1.42
SCFD1-204ENST00000463622 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
SCFD1-204ENST00000463622 ZNF594Q96JF6 807 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-204ENST00000463622 KDM5BQ9UGL1 1544 aa6.15□□□□□ -1.42
SCFD1-204ENST00000463622 PPRC1Q5VV67 1664 aaKnown RBP6.15□□□□□ -1.42
SCFD1-204ENST00000463622 TEX14Q8IWB6 1497 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 TSPOAP1O95153 1857 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 TXLNAP40222 546 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 GSK3AP49840 483 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 CTBSQ01459 385 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 MAP3K10Q02779 954 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 SH3PXD2AQ5TCZ1 1133 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 PLEKHM2Q8IWE5 1019 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 ZDHHC1Q8WTX9 485 aa6.15□□□□□ -1.43
SCFD1-204ENST00000463622 ZCCHC2Q9C0B9 1178 aaKnown RBP6.15□□□□□ -1.43
SCFD1-204ENST00000463622 SCHIP1Q9P0W5 487 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-204ENST00000463622 A0A1W2PNR3 127 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 C2CD2LO14523 706 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 LGR5O75473 907 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 MARSP56192 900 aaKnown RBP6.14□□□□□ -1.43
SCFD1-204ENST00000463622 TRIM50Q86XT4 487 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 SLC9A9Q8IVB4 645 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 KLRG1Q96E93 195 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 CALR3Q96L12 384 aaKnown RBP6.14□□□□□ -1.43
SCFD1-204ENST00000463622 CFHR5Q9BXR6 569 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 CRISPLD1Q9H336 500 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 DNAAF2Q9NVR5 837 aaKnown RBP6.14□□□□□ -1.43
SCFD1-204ENST00000463622 HCN2Q9UL51 889 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 KIF27Q86VH2 1401 aa6.14□□□□□ -1.43
SCFD1-204ENST00000463622 SFI1A8K8P3 1242 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 EPHA4P54764 986 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 C1orf229Q6ZS94 237 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-204ENST00000463622 L3MBTL2Q969R5 705 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 ZNF777Q9ULD5 760 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-204ENST00000463622 DCDC2BA2VCK2 349 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 PALM3A6NDB9 673 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-204ENST00000463622 A6NJR5 290 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 BCRP11274 1271 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 IRS1P35568 1242 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 NBPF1Q3BBV0 1214 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 ZIC5Q96T25 663 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 NDFIP2Q9NV92 336 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 ZNF232Q9UNY5 417 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 PHF24Q9UPV7 400 aa6.13□□□□□ -1.43
SCFD1-204ENST00000463622 MAFBQ9Y5Q3 323 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-204ENST00000463622 FGFR3P22607 806 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 NOS2P35228 1153 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 ATP1A2P50993 1020 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 FOXK2Q01167 660 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 KCNMA1Q12791 1236 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 BICDL1Q6ZP65 573 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 TSEN2Q8NCE0 465 aaKnown RBP6.12□□□□□ -1.43
SCFD1-204ENST00000463622 NEDD1Q8NHV4 660 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 OXCT2Q9BYC2 517 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-204ENST00000463622 TSPAN10Q9H1Z9 355 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-204ENST00000463622 ATXN7L1Q9ULK2 861 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-204ENST00000463622 NSFL1CQ9UNZ2 370 aaKnown RBP6.12□□□□□ -1.43
SCFD1-204ENST00000463622 CNTNAP5Q8WYK1 1306 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 CD109Q6YHK3 1445 aa6.12□□□□□ -1.43
SCFD1-204ENST00000463622 MAGI3Q5TCQ9 1506 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 DISP1Q96F81 1524 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 ATXN7O15265 892 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-204ENST00000463622 BMP4P12644 408 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 TATP17735 454 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-204ENST00000463622 RASA1P20936 1047 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 RASSF7Q02833 373 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 LBRQ14739 615 aaKnown RBP6.11□□□□□ -1.43
SCFD1-204ENST00000463622 GAS2L2Q8NHY3 880 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 PPP1R12CQ9BZL4 782 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 PCDHGC4Q9Y5F7 938 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
SCFD1-204ENST00000463622 KCTD17Q8N5Z5 321 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 C1orf216Q8TAB5 229 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 HCN4Q9Y3Q4 1203 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 MAP3K4Q9Y6R4 1608 aa6.11□□□□□ -1.43
SCFD1-204ENST00000463622 DKK1O94907 266 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 GDF11O95390 407 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 MAPTP10636 758 aaKnown RBP6.1□□□□□ -1.43
SCFD1-204ENST00000463622 CD33P20138 364 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 LMOD1P29536 600 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-204ENST00000463622 MAP2K3P46734 347 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 GALNT6Q8NCL4 622 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 ENAMQ9NRM1 1142 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 ZDHHC3Q9NYG2 299 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 GJA3Q9Y6H8 435 aa6.1□□□□□ -1.43
SCFD1-204ENST00000463622 SHISA8B8ZZ34 492 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 OIP5O43482 229 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 TEAD4Q15561 434 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 CDCA8Q53HL2 280 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 LRRC69Q6ZNQ3 347 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 NLRP8Q86W28 1048 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 LMTK3Q96Q04 1460 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 WDR7Q9Y4E6 1490 aa6.09□□□□□ -1.43
SCFD1-204ENST00000463622 SERTM1A2A2V5 107 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 TNP2Q05952 138 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 GRIN2CQ14957 1233 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 CRTC2Q53ET0 693 aaPredicted RBP6.09□□□□□ -1.44
SCFD1-204ENST00000463622 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.44
SCFD1-204ENST00000463622 ILDR2Q71H61 639 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms