RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 USP16Q9Y5T5 823 aa30.99■■■□□ 2.55
SSNA1-203ENST00000463511 LAMB4A4D0S4 1761 aa30.98■■■□□ 2.55
SSNA1-203ENST00000463511 PRAMEF22A3QJZ6 481 aa30.98■■■□□ 2.55
SSNA1-203ENST00000463511 U2AF1L5P0DN76 240 aaPredicted RBP30.97■■■□□ 2.55
SSNA1-203ENST00000463511 ST5P78524 1137 aa30.97■■■□□ 2.55
SSNA1-203ENST00000463511 U2AF1Q01081 240 aaKnown RBP eCLIP30.97■■■□□ 2.55
SSNA1-203ENST00000463511 MCM10Q7L590 875 aa30.97■■■□□ 2.55
SSNA1-203ENST00000463511 JMYQ8N9B5 988 aa30.96■■■□□ 2.55
SSNA1-203ENST00000463511 RTF1Q92541 710 aaKnown RBP30.96■■■□□ 2.55
SSNA1-203ENST00000463511 PPP2R1AP30153 589 aa30.95■■■□□ 2.55
SSNA1-203ENST00000463511 ERFEQ4G0M1 354 aa30.94■■■□□ 2.54
SSNA1-203ENST00000463511 SNRPA1P09661 255 aaKnown RBP30.92■■■□□ 2.54
SSNA1-203ENST00000463511 SRGNP10124 158 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 DCTN1Q14203 1278 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 STYK1Q6J9G0 422 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 DPY19L2Q6NUT2 758 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 PRPF40BQ6NWY9 871 aaKnown RBP30.92■■■□□ 2.54
SSNA1-203ENST00000463511 CNKSR1Q969H4 720 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 TAOK3Q9H2K8 898 aa30.92■■■□□ 2.54
SSNA1-203ENST00000463511 POTECB2RU33 542 aa30.91■■■□□ 2.54
SSNA1-203ENST00000463511 LTBP3Q9NS15 1303 aa30.91■■■□□ 2.54
SSNA1-203ENST00000463511 KDM3BQ7LBC6 1761 aa30.9■■■□□ 2.54
SSNA1-203ENST00000463511 NBPF5PQ86XG9 351 aaPredicted RBP30.9■■■□□ 2.54
SSNA1-203ENST00000463511 MASTLQ96GX5 879 aa30.9■■■□□ 2.54
SSNA1-203ENST00000463511 ZNF652Q9Y2D9 606 aa30.89■■■□□ 2.54
SSNA1-203ENST00000463511 CLEC4GQ6UXB4 293 aa30.88■■■□□ 2.53
SSNA1-203ENST00000463511 NUP98P52948 1817 aa30.87■■■□□ 2.53
SSNA1-203ENST00000463511 NBPF26B4DH59 902 aa30.86■■■□□ 2.53
SSNA1-203ENST00000463511 NBPF10Q6P3W6 841 aaKnown RBP30.86■■■□□ 2.53
SSNA1-203ENST00000463511 NBPF15Q8N660 670 aa30.86■■■□□ 2.53
SSNA1-203ENST00000463511 SOGA3Q5TF21 947 aa30.85■■■□□ 2.53
SSNA1-203ENST00000463511 HTATSF1O43719 755 aaKnown RBP30.84■■■□□ 2.53
SSNA1-203ENST00000463511 SCN4AP35499 1836 aa30.84■■■□□ 2.53
SSNA1-203ENST00000463511 NIP7Q9Y221 180 aaKnown RBP eCLIP30.83■■■□□ 2.53
SSNA1-203ENST00000463511 ZNF316A6NFI3 1004 aaPredicted RBP30.82■■■□□ 2.52
SSNA1-203ENST00000463511 FAM177BA6PVY3 158 aa30.81■■■□□ 2.52
SSNA1-203ENST00000463511 DDNO94850 711 aaPredicted RBP30.81■■■□□ 2.52
SSNA1-203ENST00000463511 COL13A1Q5TAT6 717 aaPredicted RBP30.81■■■□□ 2.52
SSNA1-203ENST00000463511 MIS18AQ9NYP9 233 aa30.81■■■□□ 2.52
SSNA1-203ENST00000463511 NPR1P16066 1061 aa30.8■■■□□ 2.52
SSNA1-203ENST00000463511 TAF7Q15545 349 aaPredicted RBP30.8■■■□□ 2.52
SSNA1-203ENST00000463511 CCDC93Q567U6 631 aa30.79■■■□□ 2.52
SSNA1-203ENST00000463511 TPTE2Q6XPS3 522 aa30.79■■■□□ 2.52
SSNA1-203ENST00000463511 C7orf43Q8WVR3 580 aa30.79■■■□□ 2.52
SSNA1-203ENST00000463511 POTEIP0CG38 1075 aa30.78■■■□□ 2.52
SSNA1-203ENST00000463511 POTEJP0CG39 1038 aa30.78■■■□□ 2.52
SSNA1-203ENST00000463511 KLRG2A4D1S0 409 aaPredicted RBP30.77■■■□□ 2.52
SSNA1-203ENST00000463511 RGL2O15211 777 aa30.77■■■□□ 2.52
SSNA1-203ENST00000463511 HLFQ16534 295 aa30.77■■■□□ 2.52
SSNA1-203ENST00000463511 CHADLQ6NUI6 762 aa30.76■■■□□ 2.51
SSNA1-203ENST00000463511 OLFM4Q6UX06 510 aa30.75■■■□□ 2.51
SSNA1-203ENST00000463511 NEFMP07197 916 aa30.73■■■□□ 2.51
SSNA1-203ENST00000463511 FKBP4Q02790 459 aaKnown RBP eCLIP30.73■■■□□ 2.51
SSNA1-203ENST00000463511 DDX10Q13206 875 aaKnown RBP30.73■■■□□ 2.51
SSNA1-203ENST00000463511 HSPA1AP0DMV8 641 aaKnown RBP30.72■■■□□ 2.51
SSNA1-203ENST00000463511 HSPA1BP0DMV9 641 aaKnown RBP30.72■■■□□ 2.51
SSNA1-203ENST00000463511 NGEFQ8N5V2 710 aa30.72■■■□□ 2.51
SSNA1-203ENST00000463511 ZNF277Q9NRM2 450 aaPredicted RBP30.72■■■□□ 2.51
SSNA1-203ENST00000463511 ABCC12Q96J65 1359 aa30.71■■■□□ 2.51
SSNA1-203ENST00000463511 GTF2E1P29083 439 aaPredicted RBP30.71■■■□□ 2.51
SSNA1-203ENST00000463511 IQCA1LA6NCM1 817 aa30.7■■■□□ 2.51
SSNA1-203ENST00000463511 L3MBTL3Q96JM7 780 aaPredicted RBP30.7■■■□□ 2.51
SSNA1-203ENST00000463511 ZNF541Q9H0D2 1346 aa30.7■■■□□ 2.5
SSNA1-203ENST00000463511 PNISRQ8TF01 805 aaKnown RBP30.69■■■□□ 2.5
SSNA1-203ENST00000463511 RTKN2Q8IZC4 609 aa30.68■■■□□ 2.5
SSNA1-203ENST00000463511 THUMPD2Q9BTF0 503 aaKnown RBP30.68■■■□□ 2.5
SSNA1-203ENST00000463511 CREBZFQ9NS37 354 aa30.68■■■□□ 2.5
SSNA1-203ENST00000463511 ADAMTSL1Q8N6G6 1762 aa30.68■■■□□ 2.5
SSNA1-203ENST00000463511 ALDH1B1P30837 517 aa30.67■■■□□ 2.5
SSNA1-203ENST00000463511 EIF4A1P60842 406 aaKnown RBP30.67■■■□□ 2.5
SSNA1-203ENST00000463511 NUTM1Q86Y26 1132 aa30.67■■■□□ 2.5
SSNA1-203ENST00000463511 PLEKHF1Q96S99 279 aa30.67■■■□□ 2.5
SSNA1-203ENST00000463511 TAF1DQ9H5J8 278 aaPredicted RBP30.67■■■□□ 2.5
SSNA1-203ENST00000463511 RRP7AQ9Y3A4 280 aaKnown RBP30.67■■■□□ 2.5
SSNA1-203ENST00000463511 TNS4Q8IZW8 715 aa30.66■■■□□ 2.5
SSNA1-203ENST00000463511 MAP3K15Q6ZN16 1313 aa30.66■■■□□ 2.5
SSNA1-203ENST00000463511 ERVV-1B6SEH8 477 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 NFE2L2Q16236 605 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 KIF6Q6ZMV9 814 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 TTLL7Q6ZT98 887 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 LDHDQ86WU2 507 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 NYXQ9GZU5 481 aa30.65■■■□□ 2.5
SSNA1-203ENST00000463511 MKRN1Q9UHC7 482 aaKnown RBP30.65■■■□□ 2.5
SSNA1-203ENST00000463511 SNED1Q8TER0 1413 aa30.64■■■□□ 2.5
SSNA1-203ENST00000463511 MYL6BP14649 208 aa30.64■■■□□ 2.5
SSNA1-203ENST00000463511 IARSP41252 1262 aaKnown RBP30.63■■■□□ 2.49
SSNA1-203ENST00000463511 CRY2Q49AN0 593 aa30.63■■■□□ 2.49
SSNA1-203ENST00000463511 SYNE4Q8N205 404 aa30.63■■■□□ 2.49
SSNA1-203ENST00000463511 CAPN15O75808 1086 aa30.62■■■□□ 2.49
SSNA1-203ENST00000463511 GPTP24298 496 aa30.62■■■□□ 2.49
SSNA1-203ENST00000463511 EAPPQ56P03 285 aaPredicted RBP30.62■■■□□ 2.49
SSNA1-203ENST00000463511 ZBTB3Q9H5J0 574 aa30.62■■■□□ 2.49
SSNA1-203ENST00000463511 UBN2Q6ZU65 1347 aa30.62■■■□□ 2.49
SSNA1-203ENST00000463511 PASKQ96RG2 1323 aa30.61■■■□□ 2.49
SSNA1-203ENST00000463511 MAPK8IP3Q9UPT6 1336 aa30.61■■■□□ 2.49
SSNA1-203ENST00000463511 IBTKQ9P2D0 1353 aaPredicted RBP30.61■■■□□ 2.49
SSNA1-203ENST00000463511 RIC1Q4ADV7 1423 aa30.61■■■□□ 2.49
SSNA1-203ENST00000463511 ANKRD36CQ5JPF3 1778 aa30.61■■■□□ 2.49
SSNA1-203ENST00000463511 COL4A5P29400 1685 aa30.6■■■□□ 2.49
SSNA1-203ENST00000463511 HACL1Q9UJ83 578 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms