RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 COL4A5P29400 1685 aa15.11■□□□□ 0.01
SSR3-202ENST00000463503 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
SSR3-202ENST00000463503 RNMTO43148 476 aaKnown RBP15.1■□□□□ 0.01
SSR3-202ENST00000463503 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
SSR3-202ENST00000463503 IL13P35225 146 aa15.1■□□□□ 0.01
SSR3-202ENST00000463503 SRGNP10124 158 aa15.09■□□□□ 0.01
SSR3-202ENST00000463503 RGS19P49795 217 aa15.09■□□□□ 0.01
SSR3-202ENST00000463503 STYK1Q6J9G0 422 aa15.09■□□□□ 0.01
SSR3-202ENST00000463503 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
SSR3-202ENST00000463503 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
SSR3-202ENST00000463503 LAMB4A4D0S4 1761 aa15.07■□□□□ 0
SSR3-202ENST00000463503 MLLT1Q03111 559 aaPredicted RBP15.07■□□□□ 0
SSR3-202ENST00000463503 EAPPQ56P03 285 aaPredicted RBP15.07■□□□□ 0
SSR3-202ENST00000463503 SOGA3Q5TF21 947 aa15.07■□□□□ 0
SSR3-202ENST00000463503 CNBD1Q8NA66 436 aa15.07■□□□□ 0
SSR3-202ENST00000463503 CNKSR1Q969H4 720 aa15.07■□□□□ 0
SSR3-202ENST00000463503 A0A087WZG4 1122 aa15.06■□□□□ 0
SSR3-202ENST00000463503 EPHX2P34913 555 aa15.06■□□□□ 0
SSR3-202ENST00000463503 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
SSR3-202ENST00000463503 DEFB115Q30KQ5 88 aa15.06■□□□□ 0
SSR3-202ENST00000463503 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
SSR3-202ENST00000463503 HACL1Q9UJ83 578 aa15.06■□□□□ 0
SSR3-202ENST00000463503 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
SSR3-202ENST00000463503 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
SSR3-202ENST00000463503 CAMTA2O94983 1202 aa15.05■□□□□ -0
SSR3-202ENST00000463503 MASTLQ96GX5 879 aa15.05■□□□□ -0
SSR3-202ENST00000463503 TBC1D2BQ9UPU7 963 aa15.05■□□□□ -0
SSR3-202ENST00000463503 NUP98P52948 1817 aa15.05■□□□□ -0
SSR3-202ENST00000463503 STARD3NLO95772 234 aa15.04■□□□□ -0
SSR3-202ENST00000463503 CCDC93Q567U6 631 aa15.04■□□□□ -0
SSR3-202ENST00000463503 CNTROBQ8N137 903 aa15.04■□□□□ -0
SSR3-202ENST00000463503 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
SSR3-202ENST00000463503 CCDC85CA6NKD9 419 aa15.03■□□□□ -0
SSR3-202ENST00000463503 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
SSR3-202ENST00000463503 FKBP4Q02790 459 aaKnown RBP eCLIP15.03■□□□□ -0
SSR3-202ENST00000463503 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
SSR3-202ENST00000463503 OLFM4Q6UX06 510 aa15.03■□□□□ -0
SSR3-202ENST00000463503 ZNF277Q9NRM2 450 aaPredicted RBP15.03■□□□□ -0
SSR3-202ENST00000463503 FZD9O00144 591 aa15.02■□□□□ -0
SSR3-202ENST00000463503 ST5P78524 1137 aa15.02■□□□□ -0
SSR3-202ENST00000463503 PNMA8AQ86V59 439 aaPredicted RBP15.02■□□□□ -0
SSR3-202ENST00000463503 PANK3Q9H999 370 aa15.02■□□□□ -0
SSR3-202ENST00000463503 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
SSR3-202ENST00000463503 ABT1Q9ULW3 272 aaKnown RBP15.02■□□□□ -0
SSR3-202ENST00000463503 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
SSR3-202ENST00000463503 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
SSR3-202ENST00000463503 NPC1L1Q9UHC9 1359 aa15.01□□□□□ -0.01
SSR3-202ENST00000463503 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
SSR3-202ENST00000463503 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
SSR3-202ENST00000463503 SETDB2Q96T68 719 aa15.01□□□□□ -0.01
SSR3-202ENST00000463503 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
SSR3-202ENST00000463503 KLRG2A4D1S0 409 aaPredicted RBP15□□□□□ -0.01
SSR3-202ENST00000463503 HMOX1P09601 288 aa15□□□□□ -0.01
SSR3-202ENST00000463503 FMR1Q06787 632 aaKnown RBP eCLIP15□□□□□ -0.01
SSR3-202ENST00000463503 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
SSR3-202ENST00000463503 CAPNS2Q96L46 248 aa15□□□□□ -0.01
SSR3-202ENST00000463503 ZNF330Q9Y3S2 320 aaPredicted RBP15□□□□□ -0.01
SSR3-202ENST00000463503 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
SSR3-202ENST00000463503 CYP4F22Q6NT55 531 aa14.99□□□□□ -0.01
SSR3-202ENST00000463503 ZNF790Q6PG37 636 aa14.99□□□□□ -0.01
SSR3-202ENST00000463503 GPC2Q8N158 579 aa14.99□□□□□ -0.01
SSR3-202ENST00000463503 A1BGP04217 495 aa14.98□□□□□ -0.01
SSR3-202ENST00000463503 NPR1P16066 1061 aa14.98□□□□□ -0.01
SSR3-202ENST00000463503 TSKSQ9UJT2 592 aa14.98□□□□□ -0.01
SSR3-202ENST00000463503 LAMB2P55268 1798 aa14.98□□□□□ -0.01
SSR3-202ENST00000463503 NPHP1O15259 732 aa14.97□□□□□ -0.01
SSR3-202ENST00000463503 CST9Q5W186 159 aa14.97□□□□□ -0.01
SSR3-202ENST00000463503 TEX13AQ9BXU3 409 aaPredicted RBP14.97□□□□□ -0.01
SSR3-202ENST00000463503 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
SSR3-202ENST00000463503 AKAP11Q9UKA4 1901 aa14.96□□□□□ -0.01
SSR3-202ENST00000463503 SCNN1DP51172 638 aa14.96□□□□□ -0.01
SSR3-202ENST00000463503 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.01
SSR3-202ENST00000463503 DZIP3Q86Y13 1208 aaKnown RBP14.96□□□□□ -0.01
SSR3-202ENST00000463503 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
SSR3-202ENST00000463503 GPR101Q96P66 508 aaPredicted RBP14.96□□□□□ -0.01
SSR3-202ENST00000463503 MCOLN1Q9GZU1 580 aa14.96□□□□□ -0.01
SSR3-202ENST00000463503 TLL2Q9Y6L7 1015 aa14.96□□□□□ -0.01
SSR3-202ENST00000463503 ECE1P42892 770 aa14.95□□□□□ -0.02
SSR3-202ENST00000463503 NBPF5PQ86XG9 351 aaPredicted RBP14.95□□□□□ -0.02
SSR3-202ENST00000463503 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
SSR3-202ENST00000463503 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
SSR3-202ENST00000463503 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
SSR3-202ENST00000463503 POLR2AP24928 1970 aaKnown RBP14.94□□□□□ -0.02
SSR3-202ENST00000463503 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 KDM3BQ7LBC6 1761 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 TRAF5O00463 557 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 AOC2O75106 756 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 PIP4K2AP48426 406 aaPredicted RBP14.94□□□□□ -0.02
SSR3-202ENST00000463503 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
SSR3-202ENST00000463503 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 PSMD1Q99460 953 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 BEGAINQ9BUH8 593 aa14.94□□□□□ -0.02
SSR3-202ENST00000463503 GRM1Q13255 1194 aa14.93□□□□□ -0.02
SSR3-202ENST00000463503 CLEC4GQ6UXB4 293 aa14.93□□□□□ -0.02
SSR3-202ENST00000463503 PAXIP1Q6ZW49 1069 aaPredicted RBP14.93□□□□□ -0.02
SSR3-202ENST00000463503 FMNL2Q96PY5 1086 aa14.93□□□□□ -0.02
SSR3-202ENST00000463503 DLG5Q8TDM6 1919 aa14.93□□□□□ -0.02
SSR3-202ENST00000463503 KCNQ3O43525 872 aa14.92□□□□□ -0.02
SSR3-202ENST00000463503 MAP2K2P36507 400 aa14.92□□□□□ -0.02
SSR3-202ENST00000463503 EPS15P42566 896 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms