RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 ADGRF5Q8IZF2 1346 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 NEXMIFQ5QGS0 1516 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 ARHGEF40Q8TER5 1519 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 FGAP02671 866 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 LDHCP07864 332 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 TNNI2P48788 182 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 MTA1Q13330 715 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 LONRF1Q17RB8 773 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 PPP4R2Q9NY27 417 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 CEP126Q9P2H0 1117 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
TRA2B-207ENST00000463328 PREX1Q8TCU6 1659 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 USP32Q8NFA0 1604 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 LARP6Q9BRS8 491 aaKnown RBP6.63□□□□□ -1.35
TRA2B-207ENST00000463328 IER2Q9BTL4 223 aa6.63□□□□□ -1.35
TRA2B-207ENST00000463328 FEZ2Q9UHY8 353 aaPredicted RBP6.63□□□□□ -1.35
TRA2B-207ENST00000463328 RFC5P40937 340 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 KANK3Q6NY19 840 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
TRA2B-207ENST00000463328 ATP2B1P20020 1258 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 PPP1R18Q6NYC8 613 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 NGEFQ8N5V2 710 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 ARPC5LQ9BPX5 153 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 KIF13AQ9H1H9 1805 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 TMEM131LA2VDJ0 1609 aa6.62□□□□□ -1.35
TRA2B-207ENST00000463328 IDI1Q13907 227 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 DCAF8Q5TAQ9 597 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 RSPH1Q8WYR4 309 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 UCN2Q96RP3 112 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 VDRP11473 427 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 RRM1P23921 792 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 SYCP2LQ5T4T6 812 aa6.61□□□□□ -1.35
TRA2B-207ENST00000463328 RBM42Q9BTD8 480 aaKnown RBP6.61□□□□□ -1.35
TRA2B-207ENST00000463328 CFAP65Q6ZU64 1925 aaKnown RBP6.61□□□□□ -1.35
TRA2B-207ENST00000463328 QRICH2Q9H0J4 1663 aa6.6□□□□□ -1.35
TRA2B-207ENST00000463328 RRP9O43818 475 aaKnown RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 RNF187Q5TA31 235 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 SKAP1Q86WV1 359 aa6.6□□□□□ -1.35
TRA2B-207ENST00000463328 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
TRA2B-207ENST00000463328 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 TSPOAP1O95153 1857 aa6.6□□□□□ -1.35
TRA2B-207ENST00000463328 CENPJQ9HC77 1338 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 SF3B2Q13435 895 aaKnown RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 CC2D1BQ5T0F9 858 aaKnown RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 ARHGEF28Q8N1W1 1705 aaKnown RBP6.6□□□□□ -1.35
TRA2B-207ENST00000463328 DYTNA2CJ06 578 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 PDGFRBP09619 1106 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 HSD3B2P26439 372 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 SIM2Q14190 667 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-207ENST00000463328 KCTD2Q14681 263 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 ODR4Q5SWX8 454 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-207ENST00000463328 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 TSC1Q92574 1164 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 TRIM44Q96DX7 344 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-207ENST00000463328 ZMIZ1Q9ULJ6 1067 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 NINLQ9Y2I6 1382 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 SPATA31D1Q6ZQQ2 1576 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 TIMM44O43615 452 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 PPP2R1AP30153 589 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.35
TRA2B-207ENST00000463328 MYCBPQ99417 103 aaPredicted RBP6.59□□□□□ -1.35
TRA2B-207ENST00000463328 VIL1P09327 827 aaKnown RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 NYAP1Q6ZVC0 841 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 CASS4Q9NQ75 786 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 AVENQ9NQS1 362 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 TFIP11Q9UBB9 837 aaKnown RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 ZBTB47Q9UFB7 747 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 GNALP38405 381 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 RBL2Q08999 1139 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 SP7Q8TDD2 431 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 CAPN10Q9HC96 672 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 CLTCQ00610 1675 aaKnown RBP6.58□□□□□ -1.36
TRA2B-207ENST00000463328 ZMYM3Q14202 1370 aa6.58□□□□□ -1.36
TRA2B-207ENST00000463328 DNAJA1P31689 397 aaKnown RBP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 MRPL58Q14197 206 aaKnown RBP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 MYO5BQ9ULV0 1848 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 POLR3AO14802 1390 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 NSD2O96028 1365 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 TCERG1O14776 1098 aaKnown RBP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 CAMK2BQ13554 666 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 DUSP27Q5VZP5 1158 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 TMEM51Q9NW97 253 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 SLC45A1Q9Y2W3 748 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 DLC1Q96QB1 1528 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 SAFB2Q14151 953 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 HSP90AB3PQ58FF7 597 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 C10orf62Q5T681 223 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-207ENST00000463328 USP48Q86UV5 1035 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 SEZ6LQ9BYH1 1024 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 SYNPO2Q9UMS6 1093 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 CCDC61Q9Y6R9 512 aa6.57□□□□□ -1.36
TRA2B-207ENST00000463328 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
TRA2B-207ENST00000463328 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms