RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NFATC2IPQ8NCF5 419 aa10.69□□□□□ -0.7
SMC3-202ENST00000462899 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
SMC3-202ENST00000462899 LTBP3Q9NS15 1303 aa10.68□□□□□ -0.7
SMC3-202ENST00000462899 CYP19A1P11511 503 aaPredicted RBP10.68□□□□□ -0.7
SMC3-202ENST00000462899 MAP3K13O43283 966 aa10.67□□□□□ -0.7
SMC3-202ENST00000462899 ZPR1O75312 459 aa10.67□□□□□ -0.7
SMC3-202ENST00000462899 SERPINB2P05120 415 aa10.67□□□□□ -0.7
SMC3-202ENST00000462899 MTHFSP49914 203 aa10.67□□□□□ -0.7
SMC3-202ENST00000462899 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
SMC3-202ENST00000462899 ZBTB1Q9Y2K1 713 aa10.67□□□□□ -0.7
SMC3-202ENST00000462899 C2CD5Q86YS7 1000 aa10.66□□□□□ -0.7
SMC3-202ENST00000462899 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
SMC3-202ENST00000462899 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
SMC3-202ENST00000462899 GABBR2O75899 941 aa10.65□□□□□ -0.7
SMC3-202ENST00000462899 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
SMC3-202ENST00000462899 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
SMC3-202ENST00000462899 SLC52A2Q9HAB3 445 aa10.65□□□□□ -0.7
SMC3-202ENST00000462899 TRPM7Q96QT4 1865 aa10.65□□□□□ -0.7
SMC3-202ENST00000462899 H0YIN7 160 aa10.64□□□□□ -0.71
SMC3-202ENST00000462899 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
SMC3-202ENST00000462899 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
SMC3-202ENST00000462899 WBP1LQ9NX94 342 aa10.64□□□□□ -0.71
SMC3-202ENST00000462899 LTBP1Q14766 1721 aa10.64□□□□□ -0.71
SMC3-202ENST00000462899 DDNO94850 711 aaPredicted RBP10.63□□□□□ -0.71
SMC3-202ENST00000462899 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
SMC3-202ENST00000462899 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
SMC3-202ENST00000462899 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
SMC3-202ENST00000462899 VEGFBP49765 207 aa10.63□□□□□ -0.71
SMC3-202ENST00000462899 EIF5P55010 431 aaKnown RBP10.63□□□□□ -0.71
SMC3-202ENST00000462899 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
SMC3-202ENST00000462899 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
SMC3-202ENST00000462899 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
SMC3-202ENST00000462899 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
SMC3-202ENST00000462899 SNED1Q8TER0 1413 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 C21orf2O43822 256 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
SMC3-202ENST00000462899 IL13P35225 146 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 BRIP1Q9BX63 1249 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 TAOK3Q9H2K8 898 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
SMC3-202ENST00000462899 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
SMC3-202ENST00000462899 PDE4DIPQ5VU43 2346 aa10.61□□□□□ -0.71
SMC3-202ENST00000462899 RASSF10A6NK89 507 aa10.61□□□□□ -0.71
SMC3-202ENST00000462899 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
SMC3-202ENST00000462899 HSPA8P11142 646 aaKnown RBP10.61□□□□□ -0.71
SMC3-202ENST00000462899 TBC1D9BQ66K14 1250 aa10.61□□□□□ -0.71
SMC3-202ENST00000462899 SULT6B1Q6IMI4 303 aa10.61□□□□□ -0.71
SMC3-202ENST00000462899 ABHD8Q96I13 439 aa10.61□□□□□ -0.71
SMC3-202ENST00000462899 TAF1DQ9H5J8 278 aaPredicted RBP10.61□□□□□ -0.71
SMC3-202ENST00000462899 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
SMC3-202ENST00000462899 PDE6BP35913 854 aa10.6□□□□□ -0.71
SMC3-202ENST00000462899 LBX1P52954 281 aa10.6□□□□□ -0.71
SMC3-202ENST00000462899 FAM161AQ3B820 660 aa10.6□□□□□ -0.71
SMC3-202ENST00000462899 C7orf43Q8WVR3 580 aa10.6□□□□□ -0.71
SMC3-202ENST00000462899 IQCA1LA6NCM1 817 aa10.59□□□□□ -0.71
SMC3-202ENST00000462899 RGS19P49795 217 aa10.59□□□□□ -0.71
SMC3-202ENST00000462899 PCDHB8Q9UN66 801 aa10.59□□□□□ -0.71
SMC3-202ENST00000462899 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
SMC3-202ENST00000462899 COL4A5P29400 1685 aa10.59□□□□□ -0.71
SMC3-202ENST00000462899 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.71
SMC3-202ENST00000462899 SRGNP10124 158 aa10.58□□□□□ -0.72
SMC3-202ENST00000462899 STYK1Q6J9G0 422 aa10.58□□□□□ -0.72
SMC3-202ENST00000462899 PRPF40BQ6NWY9 871 aaKnown RBP10.58□□□□□ -0.72
SMC3-202ENST00000462899 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
SMC3-202ENST00000462899 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.727e-16■■■■□ 23.2
SMC3-202ENST00000462899 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
SMC3-202ENST00000462899 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
SMC3-202ENST00000462899 CANXP27824 592 aaKnown RBP10.57□□□□□ -0.72
SMC3-202ENST00000462899 BICDL1Q6ZP65 573 aa10.57□□□□□ -0.72
SMC3-202ENST00000462899 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
SMC3-202ENST00000462899 CNKSR1Q969H4 720 aa10.57□□□□□ -0.72
SMC3-202ENST00000462899 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
SMC3-202ENST00000462899 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
SMC3-202ENST00000462899 COL3A1P02461 1466 aaPredicted RBP10.56□□□□□ -0.72
SMC3-202ENST00000462899 CASP8AP2Q9UKL3 1982 aa10.56□□□□□ -0.72
SMC3-202ENST00000462899 A0A087WZG4 1122 aa10.56□□□□□ -0.72
SMC3-202ENST00000462899 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
SMC3-202ENST00000462899 CAMTA2O94983 1202 aa10.56□□□□□ -0.72
SMC3-202ENST00000462899 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
SMC3-202ENST00000462899 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
SMC3-202ENST00000462899 LAMB4A4D0S4 1761 aa10.55□□□□□ -0.72
SMC3-202ENST00000462899 FZD9O00144 591 aa10.55□□□□□ -0.72
SMC3-202ENST00000462899 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
SMC3-202ENST00000462899 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
SMC3-202ENST00000462899 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
SMC3-202ENST00000462899 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
SMC3-202ENST00000462899 ZNF496Q96IT1 587 aaPredicted RBP10.55□□□□□ -0.72
SMC3-202ENST00000462899 PANK3Q9H999 370 aa10.55□□□□□ -0.72
SMC3-202ENST00000462899 NUP98P52948 1817 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 RGL2O15211 777 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 STARD3NLO95772 234 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
SMC3-202ENST00000462899 EPHX2P34913 555 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 FKBP4Q02790 459 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMC3-202ENST00000462899 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
SMC3-202ENST00000462899 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms