RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MAP3K15Q6ZN16 1313 aa15.14■□□□□ 0.01
CPNE1-221ENST00000462352 FKBP8Q14318 412 aa15.13■□□□□ 0.01
CPNE1-221ENST00000462352 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
CPNE1-221ENST00000462352 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
CPNE1-221ENST00000462352 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
CPNE1-221ENST00000462352 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
CPNE1-221ENST00000462352 ERVV-1B6SEH8 477 aa15.12■□□□□ 0.01
CPNE1-221ENST00000462352 G2E3Q7L622 706 aa15.12■□□□□ 0.01
CPNE1-221ENST00000462352 RGL2O15211 777 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 PTGER2P43116 358 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 HLFQ16534 295 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 ALDH1L2Q3SY69 923 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 SGIP1Q9BQI5 828 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 ZNF652Q9Y2D9 606 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 COL24A1Q17RW2 1714 aa15.11■□□□□ 0.01
CPNE1-221ENST00000462352 POLD1P28340 1107 aa15.1■□□□□ 0.01
CPNE1-221ENST00000462352 FLIIQ13045 1269 aa15.1■□□□□ 0.01
CPNE1-221ENST00000462352 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
CPNE1-221ENST00000462352 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
CPNE1-221ENST00000462352 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
CPNE1-221ENST00000462352 PLBD2Q8NHP8 589 aa15.1■□□□□ 0.01
CPNE1-221ENST00000462352 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
CPNE1-221ENST00000462352 MMP10P09238 476 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 TM4SF1P30408 202 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 RARSP54136 660 aaKnown RBP15.09■□□□□ 0.01
CPNE1-221ENST00000462352 NFIXQ14938 502 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 TBC1D9BQ66K14 1250 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 SMC4Q9NTJ3 1288 aa15.09■□□□□ 0.01
CPNE1-221ENST00000462352 DDX58O95786 925 aaKnown RBP15.08■□□□□ 0
CPNE1-221ENST00000462352 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
CPNE1-221ENST00000462352 CACNA1FO60840 1977 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 DDR1Q08345 913 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
CPNE1-221ENST00000462352 KSR2Q6VAB6 950 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 NIP7Q9Y221 180 aaKnown RBP eCLIP15.07■□□□□ 0
CPNE1-221ENST00000462352 NUP98P52948 1817 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 ATP10DQ9P241 1426 aa15.07■□□□□ 0
CPNE1-221ENST00000462352 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
CPNE1-221ENST00000462352 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 ZNF34Q8IZ26 560 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 SETDB2Q96T68 719 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 ADCY9O60503 1353 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 LRP5O75197 1615 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
CPNE1-221ENST00000462352 GPTP24298 496 aa15.05■□□□□ -0
CPNE1-221ENST00000462352 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
CPNE1-221ENST00000462352 TCIRG1Q13488 830 aa15.05■□□□□ -0
CPNE1-221ENST00000462352 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
CPNE1-221ENST00000462352 CARMIL3Q8ND23 1372 aa15.05■□□□□ -0
CPNE1-221ENST00000462352 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
CPNE1-221ENST00000462352 BCAR3O75815 825 aa15.04■□□□□ -0
CPNE1-221ENST00000462352 SERPINB2P05120 415 aa15.04■□□□□ -0
CPNE1-221ENST00000462352 MYD88Q99836 296 aa15.04■□□□□ -0
CPNE1-221ENST00000462352 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
CPNE1-221ENST00000462352 PTPRCP08575 1304 aa15.03■□□□□ -0
CPNE1-221ENST00000462352 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
CPNE1-221ENST00000462352 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
CPNE1-221ENST00000462352 PPP1R1BQ9UD71 204 aaPredicted RBP15.03■□□□□ -0
CPNE1-221ENST00000462352 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
CPNE1-221ENST00000462352 FAM177BA6PVY3 158 aa15.02■□□□□ -0
CPNE1-221ENST00000462352 F6X3S4 739 aa15.02■□□□□ -0
CPNE1-221ENST00000462352 ATP5J2-PTCD1G3V325 749 aa15.02■□□□□ -0
CPNE1-221ENST00000462352 PARP10Q53GL7 1025 aa15.02■□□□□ -0
CPNE1-221ENST00000462352 NLRP10Q86W26 655 aa15.02■□□□□ -0
CPNE1-221ENST00000462352 NOB1Q9ULX3 412 aaKnown RBP15.02■□□□□ -0
CPNE1-221ENST00000462352 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
CPNE1-221ENST00000462352 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
CPNE1-221ENST00000462352 NEXNQ0ZGT2 675 aa15.01□□□□□ -0.01
CPNE1-221ENST00000462352 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
CPNE1-221ENST00000462352 PRR5LQ6MZQ0 368 aa15.01□□□□□ -0.01
CPNE1-221ENST00000462352 NBPF5PQ86XG9 351 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-221ENST00000462352 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
CPNE1-221ENST00000462352 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
CPNE1-221ENST00000462352 IGKV5-2P06315 115 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 TRIM28Q13263 835 aaKnown RBP15□□□□□ -0.01
CPNE1-221ENST00000462352 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 PPP1R42Q7Z4L9 355 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 CNBD1Q8NA66 436 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 SRCAPQ6ZRS2 3230 aa15□□□□□ -0.01
CPNE1-221ENST00000462352 NPHP1O15259 732 aa14.99□□□□□ -0.01
CPNE1-221ENST00000462352 NTSR2O95665 410 aa14.99□□□□□ -0.01
CPNE1-221ENST00000462352 CWF19L2Q2TBE0 894 aaKnown RBP14.99□□□□□ -0.01
CPNE1-221ENST00000462352 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
CPNE1-221ENST00000462352 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
CPNE1-221ENST00000462352 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
CPNE1-221ENST00000462352 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
CPNE1-221ENST00000462352 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 BEND3Q5T5X7 828 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 SLC4A10Q6U841 1118 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
CPNE1-221ENST00000462352 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1699.2 ms