RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
PBRM1-219ENST00000462207 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
PBRM1-219ENST00000462207 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
PBRM1-219ENST00000462207 KSR2Q6VAB6 950 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
PBRM1-219ENST00000462207 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 PHF14O94880 888 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
PBRM1-219ENST00000462207 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
PBRM1-219ENST00000462207 C4AP0C0L4 1744 aa17.12■□□□□ 0.33
PBRM1-219ENST00000462207 NEFLP07196 543 aa17.12■□□□□ 0.33
PBRM1-219ENST00000462207 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
PBRM1-219ENST00000462207 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
PBRM1-219ENST00000462207 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
PBRM1-219ENST00000462207 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
PBRM1-219ENST00000462207 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
PBRM1-219ENST00000462207 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
PBRM1-219ENST00000462207 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 RTCBQ9Y3I0 505 aaKnown RBP17.11■□□□□ 0.33
PBRM1-219ENST00000462207 PXDNLA1KZ92 1463 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 BCORQ6W2J9 1755 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 FKBP8Q14318 412 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 MAP3K15Q6ZN16 1313 aa17.11■□□□□ 0.33
PBRM1-219ENST00000462207 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
PBRM1-219ENST00000462207 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
PBRM1-219ENST00000462207 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
PBRM1-219ENST00000462207 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
PBRM1-219ENST00000462207 HLFQ16534 295 aa17.09■□□□□ 0.33
PBRM1-219ENST00000462207 MYD88Q99836 296 aa17.09■□□□□ 0.33
PBRM1-219ENST00000462207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
PBRM1-219ENST00000462207 CAMTA2O94983 1202 aa17.09■□□□□ 0.33
PBRM1-219ENST00000462207 MS4A1P11836 297 aa17.09■□□□□ 0.33
PBRM1-219ENST00000462207 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
PBRM1-219ENST00000462207 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
PBRM1-219ENST00000462207 SRP68Q9UHB9 627 aaKnown RBP17.09■□□□□ 0.33
PBRM1-219ENST00000462207 ATP10DQ9P241 1426 aa17.09■□□□□ 0.33
PBRM1-219ENST00000462207 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.33
PBRM1-219ENST00000462207 BEND3Q5T5X7 828 aa17.08■□□□□ 0.33
PBRM1-219ENST00000462207 METTL22Q9BUU2 404 aaPredicted RBP17.08■□□□□ 0.33
PBRM1-219ENST00000462207 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
PBRM1-219ENST00000462207 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.32
PBRM1-219ENST00000462207 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
PBRM1-219ENST00000462207 A0A087WZG4 1122 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
PBRM1-219ENST00000462207 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 SRCIN1Q9C0H9 1055 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 NUP98P52948 1817 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 AFDNP55196 1824 aaKnown RBP17.06■□□□□ 0.32
PBRM1-219ENST00000462207 SSFA2P28290 1259 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
PBRM1-219ENST00000462207 GIGYF2Q6Y7W6 1299 aaKnown RBP17.06■□□□□ 0.32
PBRM1-219ENST00000462207 ANKRD36CQ5JPF3 1778 aa17.05■□□□□ 0.32
PBRM1-219ENST00000462207 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
PBRM1-219ENST00000462207 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
PBRM1-219ENST00000462207 ADRA2BP18089 450 aa17.05■□□□□ 0.32
PBRM1-219ENST00000462207 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
PBRM1-219ENST00000462207 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
PBRM1-219ENST00000462207 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 GPTP24298 496 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 MEIS3Q99687 375 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 STK32BQ9NY57 414 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 RFC4P35249 363 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
PBRM1-219ENST00000462207 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
PBRM1-219ENST00000462207 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
PBRM1-219ENST00000462207 ISCA1Q9BUE6 129 aa17.03■□□□□ 0.32
PBRM1-219ENST00000462207 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
PBRM1-219ENST00000462207 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
PBRM1-219ENST00000462207 ZPR1O75312 459 aa17.02■□□□□ 0.32
PBRM1-219ENST00000462207 UBN2Q6ZU65 1347 aa17.02■□□□□ 0.31
PBRM1-219ENST00000462207 ALDH1L1O75891 902 aa17.02■□□□□ 0.31
PBRM1-219ENST00000462207 MSH5O43196 834 aa17.01■□□□□ 0.31
PBRM1-219ENST00000462207 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
PBRM1-219ENST00000462207 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
PBRM1-219ENST00000462207 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
PBRM1-219ENST00000462207 GCKRQ14397 625 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 ZNF34Q8IZ26 560 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 USP44Q9H0E7 712 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 GYS1P13807 737 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 NLRP10Q86W26 655 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
PBRM1-219ENST00000462207 ZBTB40Q9NUA8 1239 aa17■□□□□ 0.31
PBRM1-219ENST00000462207 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
PBRM1-219ENST00000462207 CWC25Q9NXE8 425 aaPredicted RBP16.99■□□□□ 0.31
PBRM1-219ENST00000462207 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.31
PBRM1-219ENST00000462207 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms