RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 COL11A2P13942 1736 aaPredicted RBP26.63■■□□□ 1.85
NR1H3-216ENST00000462051 ST5P78524 1137 aa26.62■■□□□ 1.85
NR1H3-216ENST00000462051 MASTLQ96GX5 879 aa26.62■■□□□ 1.85
NR1H3-216ENST00000462051 TAOK3Q9H2K8 898 aa26.62■■□□□ 1.85
NR1H3-216ENST00000462051 PCNTO95613 3336 aa26.61■■□□□ 1.85
NR1H3-216ENST00000462051 PIP4K2AP48426 406 aaPredicted RBP26.61■■□□□ 1.85
NR1H3-216ENST00000462051 PRPF40BQ6NWY9 871 aaKnown RBP26.61■■□□□ 1.85
NR1H3-216ENST00000462051 PRAMEF22A3QJZ6 481 aa26.6■■□□□ 1.85
NR1H3-216ENST00000462051 CLEC4GQ6UXB4 293 aa26.6■■□□□ 1.85
NR1H3-216ENST00000462051 CFAP53Q96M91 514 aa26.6■■□□□ 1.85
NR1H3-216ENST00000462051 DDNO94850 711 aaPredicted RBP26.59■■□□□ 1.85
NR1H3-216ENST00000462051 SNRPA1P09661 255 aaKnown RBP26.58■■□□□ 1.85
NR1H3-216ENST00000462051 SOGA3Q5TF21 947 aa26.58■■□□□ 1.85
NR1H3-216ENST00000462051 NUDCQ9Y266 331 aa26.58■■□□□ 1.85
NR1H3-216ENST00000462051 CACNA1SQ13698 1873 aa26.57■■□□□ 1.84
NR1H3-216ENST00000462051 NBPF5PQ86XG9 351 aaPredicted RBP26.57■■□□□ 1.84
NR1H3-216ENST00000462051 C7orf43Q8WVR3 580 aa26.57■■□□□ 1.84
NR1H3-216ENST00000462051 BCORQ6W2J9 1755 aa26.56■■□□□ 1.84
NR1H3-216ENST00000462051 HSPA1AP0DMV8 641 aaKnown RBP26.56■■□□□ 1.84
NR1H3-216ENST00000462051 HSPA1BP0DMV9 641 aaKnown RBP26.56■■□□□ 1.84
NR1H3-216ENST00000462051 CHADLQ6NUI6 762 aa26.56■■□□□ 1.84
NR1H3-216ENST00000462051 MCM10Q7L590 875 aa26.56■■□□□ 1.84
NR1H3-216ENST00000462051 TNS4Q8IZW8 715 aa26.56■■□□□ 1.84
NR1H3-216ENST00000462051 RTF1Q92541 710 aaKnown RBP26.56■■□□□ 1.84
NR1H3-216ENST00000462051 POTEIP0CG38 1075 aa26.54■■□□□ 1.84
NR1H3-216ENST00000462051 POTEJP0CG39 1038 aa26.54■■□□□ 1.84
NR1H3-216ENST00000462051 U2AF1L5P0DN76 240 aaPredicted RBP26.54■■□□□ 1.84
NR1H3-216ENST00000462051 U2AF1Q01081 240 aaKnown RBP eCLIP26.54■■□□□ 1.84
NR1H3-216ENST00000462051 ZNF652Q9Y2D9 606 aa26.54■■□□□ 1.84
NR1H3-216ENST00000462051 KLRG2A4D1S0 409 aaPredicted RBP26.53■■□□□ 1.84
NR1H3-216ENST00000462051 TPTE2Q6XPS3 522 aa26.53■■□□□ 1.84
NR1H3-216ENST00000462051 ARFGEF2Q9Y6D5 1785 aa26.53■■□□□ 1.84
NR1H3-216ENST00000462051 NBPF26B4DH59 902 aa26.52■■□□□ 1.84
NR1H3-216ENST00000462051 NPR1P16066 1061 aa26.52■■□□□ 1.84
NR1H3-216ENST00000462051 DCTN1Q14203 1278 aa26.52■■□□□ 1.84
NR1H3-216ENST00000462051 NBPF10Q6P3W6 841 aaKnown RBP26.52■■□□□ 1.84
NR1H3-216ENST00000462051 NBPF15Q8N660 670 aa26.52■■□□□ 1.84
NR1H3-216ENST00000462051 CREBZFQ9NS37 354 aa26.52■■□□□ 1.84
NR1H3-216ENST00000462051 CAPN15O75808 1086 aa26.51■■□□□ 1.83
NR1H3-216ENST00000462051 HTATSF1O43719 755 aaKnown RBP26.5■■□□□ 1.83
NR1H3-216ENST00000462051 CCDC93Q567U6 631 aa26.5■■□□□ 1.83
NR1H3-216ENST00000462051 NIP7Q9Y221 180 aaKnown RBP eCLIP26.5■■□□□ 1.83
NR1H3-216ENST00000462051 RGL2O15211 777 aa26.49■■□□□ 1.83
NR1H3-216ENST00000462051 PPP2R1AP30153 589 aa26.49■■□□□ 1.83
NR1H3-216ENST00000462051 IQCA1LA6NCM1 817 aa26.48■■□□□ 1.83
NR1H3-216ENST00000462051 L3MBTL3Q96JM7 780 aaPredicted RBP26.48■■□□□ 1.83
NR1H3-216ENST00000462051 FAM177BA6PVY3 158 aa26.47■■□□□ 1.83
NR1H3-216ENST00000462051 FKBP4Q02790 459 aaKnown RBP eCLIP26.47■■□□□ 1.83
NR1H3-216ENST00000462051 TAF7Q15545 349 aaPredicted RBP26.47■■□□□ 1.83
NR1H3-216ENST00000462051 TAF1DQ9H5J8 278 aaPredicted RBP26.47■■□□□ 1.83
NR1H3-216ENST00000462051 HLFQ16534 295 aa26.46■■□□□ 1.83
NR1H3-216ENST00000462051 OLFM4Q6UX06 510 aa26.46■■□□□ 1.83
NR1H3-216ENST00000462051 ZNF277Q9NRM2 450 aaPredicted RBP26.46■■□□□ 1.83
NR1H3-216ENST00000462051 MKRN1Q9UHC7 482 aaKnown RBP26.46■■□□□ 1.83
NR1H3-216ENST00000462051 SCN4AP35499 1836 aa26.45■■□□□ 1.82
NR1H3-216ENST00000462051 LDHDQ86WU2 507 aa26.45■■□□□ 1.82
NR1H3-216ENST00000462051 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
NR1H3-216ENST00000462051 MIS18AQ9NYP9 233 aa26.45■■□□□ 1.82
NR1H3-216ENST00000462051 ALDH1B1P30837 517 aa26.44■■□□□ 1.82
NR1H3-216ENST00000462051 PASKQ96RG2 1323 aa26.43■■□□□ 1.82
NR1H3-216ENST00000462051 GTF2E1P29083 439 aaPredicted RBP26.42■■□□□ 1.82
NR1H3-216ENST00000462051 ZNF541Q9H0D2 1346 aa26.41■■□□□ 1.82
NR1H3-216ENST00000462051 ITGBL1O95965 494 aaPredicted RBP26.41■■□□□ 1.82
NR1H3-216ENST00000462051 SYNE4Q8N205 404 aa26.41■■□□□ 1.82
NR1H3-216ENST00000462051 EAPPQ56P03 285 aaPredicted RBP26.39■■□□□ 1.82
NR1H3-216ENST00000462051 NGEFQ8N5V2 710 aa26.39■■□□□ 1.82
NR1H3-216ENST00000462051 HACL1Q9UJ83 578 aa26.39■■□□□ 1.82
NR1H3-216ENST00000462051 CNTNAP1P78357 1384 aa26.38■■□□□ 1.81
NR1H3-216ENST00000462051 FZD9O00144 591 aa26.38■■□□□ 1.81
NR1H3-216ENST00000462051 IARSP41252 1262 aaKnown RBP26.38■■□□□ 1.81
NR1H3-216ENST00000462051 ERVV-1B6SEH8 477 aa26.37■■□□□ 1.81
NR1H3-216ENST00000462051 CLEC11AQ9Y240 323 aa26.37■■□□□ 1.81
NR1H3-216ENST00000462051 TMEM88BA6NKF7 163 aa26.36■■□□□ 1.81
NR1H3-216ENST00000462051 EPHX2P34913 555 aa26.36■■□□□ 1.81
NR1H3-216ENST00000462051 CRY2Q49AN0 593 aa26.36■■□□□ 1.81
NR1H3-216ENST00000462051 PNISRQ8TF01 805 aaKnown RBP26.36■■□□□ 1.81
NR1H3-216ENST00000462051 NYXQ9GZU5 481 aa26.36■■□□□ 1.81
NR1H3-216ENST00000462051 NUTM1Q86Y26 1132 aa26.35■■□□□ 1.81
NR1H3-216ENST00000462051 RRP7AQ9Y3A4 280 aaKnown RBP26.35■■□□□ 1.81
NR1H3-216ENST00000462051 NUP98P52948 1817 aa26.35■■□□□ 1.81
NR1H3-216ENST00000462051 PNMA8AQ86V59 439 aaPredicted RBP26.34■■□□□ 1.81
NR1H3-216ENST00000462051 PSMD1Q99460 953 aa26.34■■□□□ 1.81
NR1H3-216ENST00000462051 MAP3K15Q6ZN16 1313 aa26.34■■□□□ 1.81
NR1H3-216ENST00000462051 FOXN1O15353 648 aa26.33■■□□□ 1.81
NR1H3-216ENST00000462051 VEGFBP49765 207 aa26.33■■□□□ 1.81
NR1H3-216ENST00000462051 EIF4A1P60842 406 aaKnown RBP26.33■■□□□ 1.81
NR1H3-216ENST00000462051 TTLL7Q6ZT98 887 aa26.33■■□□□ 1.81
NR1H3-216ENST00000462051 GPC2Q8N158 579 aa26.33■■□□□ 1.81
NR1H3-216ENST00000462051 DLG5Q8TDM6 1919 aa26.33■■□□□ 1.81
NR1H3-216ENST00000462051 NEFMP07197 916 aa26.32■■□□□ 1.8
NR1H3-216ENST00000462051 CC2D2BQ6DHV5 1058 aa26.32■■□□□ 1.8
NR1H3-216ENST00000462051 CNTROBQ8N137 903 aa26.32■■□□□ 1.8
NR1H3-216ENST00000462051 JDP2Q8WYK2 163 aa26.32■■□□□ 1.8
NR1H3-216ENST00000462051 RNF123Q5XPI4 1314 aa26.32■■□□□ 1.8
NR1H3-216ENST00000462051 LAMB4A4D0S4 1761 aa26.31■■□□□ 1.8
NR1H3-216ENST00000462051 HOXA10P31260 410 aaPredicted RBP26.31■■□□□ 1.8
NR1H3-216ENST00000462051 PLEKHF1Q96S99 279 aa26.31■■□□□ 1.8
NR1H3-216ENST00000462051 ABCC12Q96J65 1359 aa26.31■■□□□ 1.8
NR1H3-216ENST00000462051 SNED1Q8TER0 1413 aa26.31■■□□□ 1.8
NR1H3-216ENST00000462051 ADAMTSL1Q8N6G6 1762 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms