RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 FSD2A1L4K1 749 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 TMED8Q6PL24 325 aaPredicted RBP7.36□□□□□ -1.23
CLK1-207ENST00000461981 CNKSR2Q8WXI2 1034 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 TRAPPC3LQ5T215 181 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 NLGN2Q8NFZ4 835 aa7.36□□□□□ -1.23
CLK1-207ENST00000461981 PDGFDQ9GZP0 370 aaPredicted RBP7.36□□□□□ -1.23
CLK1-207ENST00000461981 SMC1BQ8NDV3 1235 aa7.35□□□□□ -1.23
CLK1-207ENST00000461981 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
CLK1-207ENST00000461981 PIGBQ92521 554 aa7.35□□□□□ -1.23
CLK1-207ENST00000461981 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
CLK1-207ENST00000461981 LETM1O95202 739 aaPredicted RBP7.35□□□□□ -1.23
CLK1-207ENST00000461981 VPS33BQ9H267 617 aa7.35□□□□□ -1.23
CLK1-207ENST00000461981 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
CLK1-207ENST00000461981 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
CLK1-207ENST00000461981 LINC00116Q8NCU8 138 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 KLRG1Q96E93 195 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 ATG3Q9NT62 314 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 DUOX1Q9NRD9 1551 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 ST20-MTHFSA0A0A6YYL1 179 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 TM4SF1P30408 202 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 MRE11P49959 708 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 DNAJC5GQ8N7S2 189 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 SOS1Q07889 1333 aaPredicted RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 OFD1O75665 1012 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 GTPBP4Q9BZE4 634 aaKnown RBP7.34□□□□□ -1.23
CLK1-207ENST00000461981 GRPEL1Q9HAV7 217 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 PIM2Q9P1W9 311 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 NUDCQ9Y266 331 aa7.34□□□□□ -1.23
CLK1-207ENST00000461981 DDX60Q8IY21 1712 aaKnown RBP7.33□□□□□ -1.24
CLK1-207ENST00000461981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.33□□□□□ -1.24
CLK1-207ENST00000461981 AKAP4Q5JQC9 854 aa7.33□□□□□ -1.24
CLK1-207ENST00000461981 MTERF4Q7Z6M4 381 aaKnown RBP7.33□□□□□ -1.24
CLK1-207ENST00000461981 ANKRD31Q8N7Z5 1873 aa7.33□□□□□ -1.24
CLK1-207ENST00000461981 MYH14Q7Z406 1995 aaKnown RBP7.33□□□□□ -1.24
CLK1-207ENST00000461981 POLR3GLQ9BT43 218 aa7.33□□□□□ -1.24
CLK1-207ENST00000461981 SOX12O15370 315 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 FAM193AP78312 1265 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 EYA1Q99502 592 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 COL3A1P02461 1466 aaPredicted RBP7.32□□□□□ -1.24
CLK1-207ENST00000461981 GYS1P13807 737 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 MSNP26038 577 aaKnown RBP7.32□□□□□ -1.24
CLK1-207ENST00000461981 PRELPP51888 382 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 STYK1Q6J9G0 422 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 POLKQ9UBT6 870 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 HTATSF1O43719 755 aaKnown RBP7.32□□□□□ -1.24
CLK1-207ENST00000461981 KCNJ4P48050 445 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 NARFQ9UHQ1 456 aa7.32□□□□□ -1.24
CLK1-207ENST00000461981 DALRD3Q5D0E6 543 aaKnown RBP7.31□□□□□ -1.24
CLK1-207ENST00000461981 CC2D2BQ6DHV5 1058 aa7.31□□□□□ -1.24
CLK1-207ENST00000461981 ZNF609O15014 1411 aa7.31□□□□□ -1.24
CLK1-207ENST00000461981 RNF123Q5XPI4 1314 aa7.31□□□□□ -1.24
CLK1-207ENST00000461981 HSP90B1P14625 803 aaKnown RBP7.31□□□□□ -1.24
CLK1-207ENST00000461981 ITPK1Q13572 414 aa7.31□□□□□ -1.24
CLK1-207ENST00000461981 ATP6V1AP38606 617 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 EIF4A2Q14240 407 aaKnown RBP7.3□□□□□ -1.24
CLK1-207ENST00000461981 TAF3Q5VWG9 929 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 C16orf71Q8IYS4 520 aaPredicted RBP7.3□□□□□ -1.24
CLK1-207ENST00000461981 L3MBTL3Q96JM7 780 aaPredicted RBP7.3□□□□□ -1.24
CLK1-207ENST00000461981 COL11A2P13942 1736 aaPredicted RBP7.3□□□□□ -1.24
CLK1-207ENST00000461981 CARD14Q9BXL6 1004 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 GNPATO15228 680 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 MMP10P09238 476 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 LMNB1P20700 586 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 KCNA3P22001 575 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 KDM3BQ7LBC6 1761 aa7.3□□□□□ -1.24
CLK1-207ENST00000461981 CEMIPQ8WUJ3 1361 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 PRR29P0C7W0 189 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 C1orf141Q5JVX7 400 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 CDHR2Q9BYE9 1310 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
CLK1-207ENST00000461981 POLRMTO00411 1230 aaKnown RBP7.29□□□□□ -1.24
CLK1-207ENST00000461981 RFC4P35249 363 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 ZNF771Q7L3S4 317 aaPredicted RBP7.29□□□□□ -1.24
CLK1-207ENST00000461981 ZSCAN30Q86W11 494 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
CLK1-207ENST00000461981 DYNC1I1O14576 645 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 CLGNO14967 610 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 PDE6BP35913 854 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 CLEC4GQ6UXB4 293 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 EP400NLQ6ZTU2 488 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 ARHGEF1Q92888 912 aaKnown RBP7.28□□□□□ -1.24
CLK1-207ENST00000461981 CARMIL3Q8ND23 1372 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 LRRC37AA6NMS7 1700 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 LAMB1P07942 1786 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 GLTPD2A6NH11 291 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 SPDYE4A6NLX3 237 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 TERF1P54274 439 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 CABP4P57796 275 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 JARID2Q92833 1246 aaPredicted RBP7.28□□□□□ -1.24
CLK1-207ENST00000461981 DNAJC2Q99543 621 aaKnown RBP7.28□□□□□ -1.24
CLK1-207ENST00000461981 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 COL15A1P39059 1388 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms