RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RNF181Q9P0P0 153 aa24.91■■□□□ 1.58
VARS-220ENST00000461874 RRP7AQ9Y3A4 280 aaKnown RBP24.91■■□□□ 1.58
VARS-220ENST00000461874 RUNDC1Q96C34 613 aa24.9■■□□□ 1.58
VARS-220ENST00000461874 NIP7Q9Y221 180 aaKnown RBP eCLIP24.9■■□□□ 1.58
VARS-220ENST00000461874 HLFQ16534 295 aa24.89■■□□□ 1.58
VARS-220ENST00000461874 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
VARS-220ENST00000461874 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
VARS-220ENST00000461874 DLEC1Q9Y238 1755 aa24.89■■□□□ 1.57
VARS-220ENST00000461874 ANKRD31Q8N7Z5 1873 aa24.88■■□□□ 1.57
VARS-220ENST00000461874 RASSF7Q02833 373 aa24.88■■□□□ 1.57
VARS-220ENST00000461874 NEUROD2Q15784 382 aa24.88■■□□□ 1.57
VARS-220ENST00000461874 LAMB4A4D0S4 1761 aa24.88■■□□□ 1.57
VARS-220ENST00000461874 ERVV-1B6SEH8 477 aa24.87■■□□□ 1.57
VARS-220ENST00000461874 TPTE2Q6XPS3 522 aa24.87■■□□□ 1.57
VARS-220ENST00000461874 SRGNP10124 158 aa24.86■■□□□ 1.57
VARS-220ENST00000461874 STYK1Q6J9G0 422 aa24.86■■□□□ 1.57
VARS-220ENST00000461874 ERBB4Q15303 1308 aa24.86■■□□□ 1.57
VARS-220ENST00000461874 MYL6BP14649 208 aa24.85■■□□□ 1.57
VARS-220ENST00000461874 TTLL7Q6ZT98 887 aa24.85■■□□□ 1.57
VARS-220ENST00000461874 CNKSR1Q969H4 720 aa24.85■■□□□ 1.57
VARS-220ENST00000461874 TRIM35Q9UPQ4 493 aa24.85■■□□□ 1.57
VARS-220ENST00000461874 MAP3K15Q6ZN16 1313 aa24.85■■□□□ 1.57
VARS-220ENST00000461874 LMNB1P20700 586 aa24.84■■□□□ 1.57
VARS-220ENST00000461874 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
VARS-220ENST00000461874 MASTLQ96GX5 879 aa24.84■■□□□ 1.57
VARS-220ENST00000461874 NMRK2Q9NPI5 230 aa24.84■■□□□ 1.57
VARS-220ENST00000461874 KLRG2A4D1S0 409 aaPredicted RBP24.83■■□□□ 1.57
VARS-220ENST00000461874 NFKBIEO00221 500 aa24.83■■□□□ 1.57
VARS-220ENST00000461874 C21orf2O43822 256 aa24.83■■□□□ 1.57
VARS-220ENST00000461874 PRELPP51888 382 aa24.83■■□□□ 1.57
VARS-220ENST00000461874 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
VARS-220ENST00000461874 FAM177BA6PVY3 158 aa24.82■■□□□ 1.56
VARS-220ENST00000461874 CHL1O00533 1208 aa24.82■■□□□ 1.56
VARS-220ENST00000461874 ZNF219Q9P2Y4 722 aaPredicted RBP24.82■■□□□ 1.56
VARS-220ENST00000461874 COL11A2P13942 1736 aaPredicted RBP24.81■■□□□ 1.56
VARS-220ENST00000461874 EIF2S2P20042 333 aaKnown RBP24.81■■□□□ 1.56
VARS-220ENST00000461874 PDIA6Q15084 440 aa24.81■■□□□ 1.56
VARS-220ENST00000461874 ZC3H4Q9UPT8 1303 aaKnown RBP24.81■■□□□ 1.56
VARS-220ENST00000461874 SBF1O95248 1867 aa24.81■■□□□ 1.56
VARS-220ENST00000461874 PRPF40BQ6NWY9 871 aaKnown RBP24.8■■□□□ 1.56
VARS-220ENST00000461874 LRP10Q7Z4F1 713 aa24.8■■□□□ 1.56
VARS-220ENST00000461874 ZBTB3Q9H5J0 574 aa24.8■■□□□ 1.56
VARS-220ENST00000461874 KDM2BQ8NHM5 1336 aa24.8■■□□□ 1.56
VARS-220ENST00000461874 NPR1P16066 1061 aa24.79■■□□□ 1.56
VARS-220ENST00000461874 TOMM70O94826 608 aa24.78■■□□□ 1.56
VARS-220ENST00000461874 GTF2E1P29083 439 aaPredicted RBP24.78■■□□□ 1.56
VARS-220ENST00000461874 NYXQ9GZU5 481 aa24.78■■□□□ 1.56
VARS-220ENST00000461874 HSPA6P17066 643 aa24.77■■□□□ 1.56
VARS-220ENST00000461874 PROSER3Q2NL68 480 aa24.77■■□□□ 1.56
VARS-220ENST00000461874 LAS1LQ9Y4W2 734 aaKnown RBP24.77■■□□□ 1.56
VARS-220ENST00000461874 GPTP24298 496 aa24.76■■□□□ 1.55
VARS-220ENST00000461874 SOGA3Q5TF21 947 aa24.76■■□□□ 1.55
VARS-220ENST00000461874 GIGYF2Q6Y7W6 1299 aaKnown RBP24.76■■□□□ 1.55
VARS-220ENST00000461874 ZNF34Q8IZ26 560 aa24.76■■□□□ 1.55
VARS-220ENST00000461874 C7orf43Q8WVR3 580 aa24.76■■□□□ 1.55
VARS-220ENST00000461874 ANXA1P04083 346 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 KRT24Q2M2I5 525 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 UBN2Q6ZU65 1347 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 LTBP3Q9NS15 1303 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 CEP350Q5VT06 3117 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 SLX4Q8IY92 1834 aa24.75■■□□□ 1.55
VARS-220ENST00000461874 NUTM1Q86Y26 1132 aa24.74■■□□□ 1.55
VARS-220ENST00000461874 TAOK3Q9H2K8 898 aa24.74■■□□□ 1.55
VARS-220ENST00000461874 RRAGCQ9HB90 399 aa24.74■■□□□ 1.55
VARS-220ENST00000461874 ABCC12Q96J65 1359 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
VARS-220ENST00000461874 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 APAF1O14727 1248 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 ERFEQ4G0M1 354 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 SUSD4Q5VX71 490 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 NECTIN2Q92692 538 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 CFAP44Q96MT7 982 aa24.73■■□□□ 1.55
VARS-220ENST00000461874 NUP98P52948 1817 aa24.72■■□□□ 1.55
VARS-220ENST00000461874 CRY2Q49AN0 593 aa24.72■■□□□ 1.55
VARS-220ENST00000461874 C16orf71Q8IYS4 520 aaPredicted RBP24.71■■□□□ 1.55
VARS-220ENST00000461874 RBM46Q8TBY0 533 aaKnown RBP24.71■■□□□ 1.55
VARS-220ENST00000461874 DDX21Q9NR30 783 aaKnown RBP eCLIP24.71■■□□□ 1.55
VARS-220ENST00000461874 NTSR2O95665 410 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 ALDH1B1P30837 517 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 PARP10Q53GL7 1025 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 CCDC93Q567U6 631 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 COPS6Q7L5N1 327 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.54
VARS-220ENST00000461874 HOXB7P09629 217 aa24.69■■□□□ 1.54
VARS-220ENST00000461874 PPP1R42Q7Z4L9 355 aa24.69■■□□□ 1.54
VARS-220ENST00000461874 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
VARS-220ENST00000461874 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
VARS-220ENST00000461874 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
VARS-220ENST00000461874 MBIPQ9NS73 344 aa24.68■■□□□ 1.54
VARS-220ENST00000461874 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
VARS-220ENST00000461874 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
VARS-220ENST00000461874 CCDC184Q52MB2 194 aa24.67■■□□□ 1.54
VARS-220ENST00000461874 HDGFL1Q5TGJ6 251 aa24.67■■□□□ 1.54
VARS-220ENST00000461874 CHPF2Q9P2E5 772 aa24.67■■□□□ 1.54
VARS-220ENST00000461874 VEGFAP15692 232 aaPredicted RBP24.66■■□□□ 1.54
VARS-220ENST00000461874 HOXA10P31260 410 aaPredicted RBP24.66■■□□□ 1.54
VARS-220ENST00000461874 DPY19L2Q6NUT2 758 aa24.66■■□□□ 1.54
VARS-220ENST00000461874 OLFM4Q6UX06 510 aa24.66■■□□□ 1.54
VARS-220ENST00000461874 UTP14AQ9BVJ6 771 aaKnown RBP24.66■■□□□ 1.54
VARS-220ENST00000461874 CCDC88AQ3V6T2 1871 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms