RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 PLA2R1Q13018 1463 aa6.39□□□□□ -1.39
CDHR3-202ENST00000461766 ADGRB2O60241 1585 aa6.39□□□□□ -1.39
CDHR3-202ENST00000461766 DYNC1I1O14576 645 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-202ENST00000461766 BCAR3O75815 825 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 CT47B1P0C2W7 299 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-202ENST00000461766 NCLP19338 710 aaKnown RBP6.38□□□□□ -1.39
CDHR3-202ENST00000461766 RBM25P49756 843 aaKnown RBP6.38□□□□□ -1.39
CDHR3-202ENST00000461766 RAB3GAP1Q15042 981 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 OCSTAMPQ9BR26 566 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 PPP1R12CQ9BZL4 782 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 TRPM2O94759 1503 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 CLTCL1P53675 1640 aa6.38□□□□□ -1.39
CDHR3-202ENST00000461766 ZC3H13Q5T200 1668 aaKnown RBP6.38□□□□□ -1.39
CDHR3-202ENST00000461766 IFT172Q9UG01 1749 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 PPRC1Q5VV67 1664 aaKnown RBP6.37□□□□□ -1.39
CDHR3-202ENST00000461766 INO80Q9ULG1 1556 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-202ENST00000461766 PLB1Q6P1J6 1458 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 APAF1O14727 1248 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-202ENST00000461766 LAPTM4AQ15012 233 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 NBPF1Q3BBV0 1214 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 CFAP70Q5T0N1 1121 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 SH3BP5LQ7L8J4 393 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 WDR63Q8IWG1 891 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 ZNF592Q92610 1267 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 PRDM4Q9UKN5 801 aa6.37□□□□□ -1.39
CDHR3-202ENST00000461766 PALM3A6NDB9 673 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-202ENST00000461766 HSP90AB1P08238 724 aaKnown RBP6.36□□□□□ -1.39
CDHR3-202ENST00000461766 RARSP54136 660 aaKnown RBP6.36□□□□□ -1.39
CDHR3-202ENST00000461766 ZNF445P59923 1031 aa6.36□□□□□ -1.39
CDHR3-202ENST00000461766 HDAC1Q13547 482 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-202ENST00000461766 CCDC27Q2M243 656 aa6.36□□□□□ -1.39
CDHR3-202ENST00000461766 KLHL40Q2TBA0 621 aa6.36□□□□□ -1.39
CDHR3-202ENST00000461766 UTP14CQ5TAP6 766 aaKnown RBP6.36□□□□□ -1.39
CDHR3-202ENST00000461766 ARHGAP9Q9BRR9 750 aa6.36□□□□□ -1.39
CDHR3-202ENST00000461766 TET3O43151 1660 aa6.36□□□□□ -1.39
CDHR3-202ENST00000461766 MFAP1P55081 439 aaKnown RBP6.35□□□□□ -1.39
CDHR3-202ENST00000461766 MCCD1P59942 119 aaPredicted RBP6.35□□□□□ -1.39
CDHR3-202ENST00000461766 MVPQ14764 893 aaKnown RBP6.35□□□□□ -1.39
CDHR3-202ENST00000461766 LINC01559Q495D7 138 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 SH3RF1Q7Z6J0 888 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 ADAM32Q8TC27 787 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 PANK1Q8TE04 598 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 TNPO1Q92973 898 aaKnown RBP6.35□□□□□ -1.39
CDHR3-202ENST00000461766 NOL7Q9UMY1 257 aaKnown RBP6.35□□□□□ -1.39
CDHR3-202ENST00000461766 DEPDC5O75140 1603 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 ABCA6Q8N139 1617 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 MAP3K4Q9Y6R4 1608 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 SYCP2Q9BX26 1530 aa6.35□□□□□ -1.39
CDHR3-202ENST00000461766 UHRF1BP1LA0JNW5 1464 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 MYOM2P54296 1465 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 SBNO2Q9Y2G9 1366 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 PLEKHD1A6NEE1 506 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 PPEF1O14829 653 aaPredicted RBP6.34□□□□□ -1.39
CDHR3-202ENST00000461766 GGCXP38435 758 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 RIPK4P57078 832 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 SASS6Q6UVJ0 657 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 TBC1D9Q6ZT07 1266 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 GAS2L3Q86XJ1 694 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 CCDC146Q8IYE0 955 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 ANKLE1Q8NAG6 615 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 ZNF511Q8NB15 262 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 BAP1Q92560 729 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 PBXIP1Q96AQ6 731 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 RUNDC1Q96C34 613 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 TFIP11Q9UBB9 837 aaKnown RBP6.34□□□□□ -1.39
CDHR3-202ENST00000461766 PCDHB9Q9Y5E1 797 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 MAFBQ9Y5Q3 323 aaPredicted RBP6.34□□□□□ -1.39
CDHR3-202ENST00000461766 DIP2BQ9P265 1576 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 SETBP1Q9Y6X0 1596 aa6.34□□□□□ -1.39
CDHR3-202ENST00000461766 KIF1BO60333 1816 aa6.34□□□□□ -1.4
CDHR3-202ENST00000461766 KIF13AQ9H1H9 1805 aa6.34□□□□□ -1.4
CDHR3-202ENST00000461766 ATP10BO94823 1461 aa6.34□□□□□ -1.4
CDHR3-202ENST00000461766 UQCRHLA0A096LP55 91 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 K7ELQ4 463 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-202ENST00000461766 PIK3CDO00329 1044 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 ATP9BO43861 1147 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 UQCRHP07919 91 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 RFX1P22670 979 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 LMOD1P29536 600 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-202ENST00000461766 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-202ENST00000461766 ZKSCAN2Q63HK3 967 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 Q6ZNB5 142 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 BPHLQ86WA6 291 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-202ENST00000461766 NFATC2IPQ8NCF5 419 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 FOXJ1Q92949 421 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 PDLIM2Q96JY6 352 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 CARD14Q9BXL6 1004 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 CCDC39Q9UFE4 941 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 DDX19BQ9UMR2 479 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 ERVK-7P63135 1459 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 ANKRD26Q9UPS8 1709 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 QRICH2Q9H0J4 1663 aa6.33□□□□□ -1.4
CDHR3-202ENST00000461766 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-202ENST00000461766 MAGEB6P1A0A0J9YX57 407 aa6.32□□□□□ -1.4
CDHR3-202ENST00000461766 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
CDHR3-202ENST00000461766 NUCB2P80303 420 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms