RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ZNF784Q8NCA9 323 aaPredicted RBP19.37■□□□□ 0.69
TMEM39A-203ENST00000461654 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
TMEM39A-203ENST00000461654 NARFQ9UHQ1 456 aa19.37■□□□□ 0.69
TMEM39A-203ENST00000461654 ZBTB1Q9Y2K1 713 aa19.37■□□□□ 0.69
TMEM39A-203ENST00000461654 C10orf71Q711Q0 1435 aa19.36■□□□□ 0.69
TMEM39A-203ENST00000461654 EIF5P55010 431 aaKnown RBP19.36■□□□□ 0.69
TMEM39A-203ENST00000461654 KIF13BQ9NQT8 1826 aa19.36■□□□□ 0.69
TMEM39A-203ENST00000461654 KDM3BQ7LBC6 1761 aa19.36■□□□□ 0.69
TMEM39A-203ENST00000461654 UTRNP46939 3433 aa19.36■□□□□ 0.69
TMEM39A-203ENST00000461654 KCNQ3O43525 872 aa19.35■□□□□ 0.69
TMEM39A-203ENST00000461654 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
TMEM39A-203ENST00000461654 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
TMEM39A-203ENST00000461654 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
TMEM39A-203ENST00000461654 COL15A1P39059 1388 aa19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 A0A087WZG4 1122 aa19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 DDR1Q08345 913 aa19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
TMEM39A-203ENST00000461654 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.68
TMEM39A-203ENST00000461654 POLRMTO00411 1230 aaKnown RBP19.32■□□□□ 0.68
TMEM39A-203ENST00000461654 TCERG1O14776 1098 aaKnown RBP19.32■□□□□ 0.68
TMEM39A-203ENST00000461654 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
TMEM39A-203ENST00000461654 FTSJ3Q8IY81 847 aaKnown RBP19.32■□□□□ 0.68
TMEM39A-203ENST00000461654 BCL2L12Q9HB09 334 aa19.32■□□□□ 0.68
TMEM39A-203ENST00000461654 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
TMEM39A-203ENST00000461654 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
TMEM39A-203ENST00000461654 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
TMEM39A-203ENST00000461654 A0A0G2JLW4 131 aa19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 NFIXQ14938 502 aa19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 API5Q9BZZ5 524 aaKnown RBP19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 KIAA1551Q9HCM1 1747 aa19.3■□□□□ 0.68
TMEM39A-203ENST00000461654 DPEP1P16444 411 aa19.29■□□□□ 0.68
TMEM39A-203ENST00000461654 KCNA3P22001 575 aa19.29■□□□□ 0.68
TMEM39A-203ENST00000461654 DZIP1LQ8IYY4 767 aaKnown RBP19.29■□□□□ 0.68
TMEM39A-203ENST00000461654 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
TMEM39A-203ENST00000461654 USP16Q9Y5T5 823 aa19.29■□□□□ 0.68
TMEM39A-203ENST00000461654 A1BGP04217 495 aa19.28■□□□□ 0.68
TMEM39A-203ENST00000461654 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
TMEM39A-203ENST00000461654 PTPRCP08575 1304 aa19.27■□□□□ 0.68
TMEM39A-203ENST00000461654 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
TMEM39A-203ENST00000461654 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
TMEM39A-203ENST00000461654 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
TMEM39A-203ENST00000461654 TRIM27P14373 513 aa19.26■□□□□ 0.67
TMEM39A-203ENST00000461654 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
TMEM39A-203ENST00000461654 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
TMEM39A-203ENST00000461654 PPP4R2Q9NY27 417 aa19.26■□□□□ 0.67
TMEM39A-203ENST00000461654 SERPINB2P05120 415 aa19.25■□□□□ 0.67
TMEM39A-203ENST00000461654 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
TMEM39A-203ENST00000461654 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
TMEM39A-203ENST00000461654 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
TMEM39A-203ENST00000461654 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
TMEM39A-203ENST00000461654 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
TMEM39A-203ENST00000461654 TBC1D2BQ9UPU7 963 aa19.24■□□□□ 0.67
TMEM39A-203ENST00000461654 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
TMEM39A-203ENST00000461654 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
TMEM39A-203ENST00000461654 NRXN2Q9P2S2 1712 aa19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 RGL2O15211 777 aa19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 HYPKQ9NX55 129 aa19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 CHPF2Q9P2E5 772 aa19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
TMEM39A-203ENST00000461654 ADCY9O60503 1353 aa19.22■□□□□ 0.67
TMEM39A-203ENST00000461654 CAMTA2O94983 1202 aa19.22■□□□□ 0.67
TMEM39A-203ENST00000461654 FLIIQ13045 1269 aa19.22■□□□□ 0.67
TMEM39A-203ENST00000461654 AAMPQ13685 434 aa19.22■□□□□ 0.67
TMEM39A-203ENST00000461654 NBPF26B4DH59 902 aa19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 BRCA1P38398 1863 aaKnown RBP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 TBC1D9BQ66K14 1250 aa19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 NBPF10Q6P3W6 841 aaKnown RBP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 DZIP3Q86Y13 1208 aaKnown RBP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 NBPF15Q8N660 670 aa19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
TMEM39A-203ENST00000461654 CHRNA5P30532 468 aa19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 ITPRIPQ8IWB1 547 aa19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
TMEM39A-203ENST00000461654 RLBP1P12271 317 aa19.19■□□□□ 0.66
TMEM39A-203ENST00000461654 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
TMEM39A-203ENST00000461654 G2E3Q7L622 706 aa19.19■□□□□ 0.66
TMEM39A-203ENST00000461654 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 SCN7AQ01118 1682 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 ARHGAP27Q6ZUM4 889 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 CCDC136Q96JN2 1154 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 SETDB2Q96T68 719 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 ABCC4O15439 1325 aa19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
TMEM39A-203ENST00000461654 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms