RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 MTHFSP49914 203 aa12.84□□□□□ -0.35
NECTIN3-202ENST00000461477 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
NECTIN3-202ENST00000461477 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
NECTIN3-202ENST00000461477 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
NECTIN3-202ENST00000461477 HSP90AB1P08238 724 aaKnown RBP12.83□□□□□ -0.36
NECTIN3-202ENST00000461477 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
NECTIN3-202ENST00000461477 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
NECTIN3-202ENST00000461477 UBR2Q8IWV8 1755 aa12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 CYP19A1P11511 503 aaPredicted RBP12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
NECTIN3-202ENST00000461477 COL15A1P39059 1388 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 MRC1P22897 1456 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 FOXN1O15353 648 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
NECTIN3-202ENST00000461477 ZPR1O75312 459 aa12.8□□□□□ -0.36
NECTIN3-202ENST00000461477 SERPINB2P05120 415 aa12.8□□□□□ -0.36
NECTIN3-202ENST00000461477 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
NECTIN3-202ENST00000461477 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
NECTIN3-202ENST00000461477 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
NECTIN3-202ENST00000461477 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
NECTIN3-202ENST00000461477 IL13P35225 146 aa12.78□□□□□ -0.36
NECTIN3-202ENST00000461477 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
NECTIN3-202ENST00000461477 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
NECTIN3-202ENST00000461477 ARFGEF2Q9Y6D5 1785 aa12.78□□□□□ -0.36
NECTIN3-202ENST00000461477 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 C21orf2O43822 256 aa12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 SEC24BO95487 1268 aa12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 CNTNAP1P78357 1384 aa12.77□□□□□ -0.37
NECTIN3-202ENST00000461477 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 IER5LQ5T953 404 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 TBC1D9BQ66K14 1250 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 PASKQ96RG2 1323 aa12.76□□□□□ -0.37
NECTIN3-202ENST00000461477 H0YIN7 160 aa12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 RNMTO43148 476 aaKnown RBP12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 ERFEQ4G0M1 354 aa12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 PANK3Q9H999 370 aa12.75□□□□□ -0.37
NECTIN3-202ENST00000461477 SLC34A2O95436 690 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 VEGFBP49765 207 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 SCN4AP35499 1836 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
NECTIN3-202ENST00000461477 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
NECTIN3-202ENST00000461477 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
NECTIN3-202ENST00000461477 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
NECTIN3-202ENST00000461477 PRDM10Q9NQV6 1147 aa12.72□□□□□ -0.37
NECTIN3-202ENST00000461477 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 HMOX1P09601 288 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 BRIP1Q9BX63 1249 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
NECTIN3-202ENST00000461477 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 LBX1P52954 281 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 C7orf43Q8WVR3 580 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 TAOK3Q9H2K8 898 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 TAF1DQ9H5J8 278 aaPredicted RBP12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 LTBP1Q14766 1721 aa12.7□□□□□ -0.38
NECTIN3-202ENST00000461477 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
NECTIN3-202ENST00000461477 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
NECTIN3-202ENST00000461477 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
NECTIN3-202ENST00000461477 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
NECTIN3-202ENST00000461477 COL4A5P29400 1685 aa12.69□□□□□ -0.38
NECTIN3-202ENST00000461477 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 SRGNP10124 158 aa12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 HSPA8P11142 646 aaKnown RBP12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 LDHDQ86WU2 507 aa12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
NECTIN3-202ENST00000461477 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 A1BGP04217 495 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 PDE6BP35913 854 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 PSEN1P49768 467 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 ABHD8Q96I13 439 aa12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 COLQQ9Y215 455 aaPredicted RBP12.67□□□□□ -0.38
NECTIN3-202ENST00000461477 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms