RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
SYN3-206ENST00000461446 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
SYN3-206ENST00000461446 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
SYN3-206ENST00000461446 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
SYN3-206ENST00000461446 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
SYN3-206ENST00000461446 MYL6BP14649 208 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 HLFQ16534 295 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
SYN3-206ENST00000461446 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
SYN3-206ENST00000461446 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
SYN3-206ENST00000461446 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
SYN3-206ENST00000461446 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
SYN3-206ENST00000461446 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
SYN3-206ENST00000461446 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
SYN3-206ENST00000461446 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
SYN3-206ENST00000461446 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
SYN3-206ENST00000461446 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 E9PSI1 815 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
SYN3-206ENST00000461446 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 NPHP1O15259 732 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 ANXA1P04083 346 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 HOXB7P09629 217 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
SYN3-206ENST00000461446 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYN3-206ENST00000461446 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
SYN3-206ENST00000461446 H0YIN7 160 aa13.11□□□□□ -0.31
SYN3-206ENST00000461446 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
SYN3-206ENST00000461446 PDIA6Q15084 440 aa13.11□□□□□ -0.31
SYN3-206ENST00000461446 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
SYN3-206ENST00000461446 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
SYN3-206ENST00000461446 ZNF526Q8TF50 670 aaPredicted RBP13.11□□□□□ -0.31
SYN3-206ENST00000461446 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
SYN3-206ENST00000461446 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
SYN3-206ENST00000461446 ADCY9O60503 1353 aa13.1□□□□□ -0.31
SYN3-206ENST00000461446 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
SYN3-206ENST00000461446 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
SYN3-206ENST00000461446 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYN3-206ENST00000461446 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
SYN3-206ENST00000461446 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
SYN3-206ENST00000461446 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
SYN3-206ENST00000461446 PDE6BP35913 854 aa13.09□□□□□ -0.31
SYN3-206ENST00000461446 ST5P78524 1137 aa13.09□□□□□ -0.31
SYN3-206ENST00000461446 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
SYN3-206ENST00000461446 KIF6Q6ZMV9 814 aa13.09□□□□□ -0.31
SYN3-206ENST00000461446 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
SYN3-206ENST00000461446 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
SYN3-206ENST00000461446 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 RGL2O15211 777 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 GPTP24298 496 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
SYN3-206ENST00000461446 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
SYN3-206ENST00000461446 VAMP4O75379 141 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 SRGNP10124 158 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
SYN3-206ENST00000461446 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
SYN3-206ENST00000461446 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
SYN3-206ENST00000461446 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
SYN3-206ENST00000461446 RASSF7Q02833 373 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 COPS6Q7L5N1 327 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
SYN3-206ENST00000461446 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYN3-206ENST00000461446 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
SYN3-206ENST00000461446 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 NUP98P52948 1817 aa13.06□□□□□ -0.32
SYN3-206ENST00000461446 C21orf2O43822 256 aa13.05□□□□□ -0.32
SYN3-206ENST00000461446 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
SYN3-206ENST00000461446 PRELPP51888 382 aa13.05□□□□□ -0.32
SYN3-206ENST00000461446 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
SYN3-206ENST00000461446 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
SYN3-206ENST00000461446 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
SYN3-206ENST00000461446 C1QTNF8P60827 252 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 ERFEQ4G0M1 354 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 PDZRN3Q9UPQ7 1066 aa13.04□□□□□ -0.32
SYN3-206ENST00000461446 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms