RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
NUP50-213ENST00000461437 H0YIN7 160 aa20.43■□□□□ 0.86
NUP50-213ENST00000461437 NPHP1O15259 732 aa20.43■□□□□ 0.86
NUP50-213ENST00000461437 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
NUP50-213ENST00000461437 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
NUP50-213ENST00000461437 ZNF622Q969S3 477 aaKnown RBP eCLIP20.43■□□□□ 0.86
NUP50-213ENST00000461437 RNF181Q9P0P0 153 aa20.42■□□□□ 0.86
NUP50-213ENST00000461437 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
NUP50-213ENST00000461437 PRELPP51888 382 aa20.41■□□□□ 0.86
NUP50-213ENST00000461437 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
NUP50-213ENST00000461437 TTLL6Q8N841 843 aa20.41■□□□□ 0.86
NUP50-213ENST00000461437 NIP7Q9Y221 180 aaKnown RBP eCLIP20.41■□□□□ 0.86
NUP50-213ENST00000461437 TNRC6CQ9HCJ0 1690 aaKnown RBP20.41■□□□□ 0.86
NUP50-213ENST00000461437 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
NUP50-213ENST00000461437 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
NUP50-213ENST00000461437 KIF3CO14782 793 aa20.4■□□□□ 0.86
NUP50-213ENST00000461437 FER1L6Q2WGJ9 1857 aa20.4■□□□□ 0.86
NUP50-213ENST00000461437 IFFO2Q5TF58 517 aa20.4■□□□□ 0.86
NUP50-213ENST00000461437 BRIP1Q9BX63 1249 aa20.4■□□□□ 0.86
NUP50-213ENST00000461437 ANXA1P04083 346 aa20.39■□□□□ 0.85
NUP50-213ENST00000461437 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
NUP50-213ENST00000461437 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
NUP50-213ENST00000461437 NECTIN2Q92692 538 aa20.39■□□□□ 0.85
NUP50-213ENST00000461437 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
NUP50-213ENST00000461437 NMRK2Q9NPI5 230 aa20.39■□□□□ 0.85
NUP50-213ENST00000461437 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
NUP50-213ENST00000461437 PDE6BP35913 854 aa20.38■□□□□ 0.85
NUP50-213ENST00000461437 ST5P78524 1137 aa20.38■□□□□ 0.85
NUP50-213ENST00000461437 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
NUP50-213ENST00000461437 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
NUP50-213ENST00000461437 ZNF652Q9Y2D9 606 aa20.38■□□□□ 0.85
NUP50-213ENST00000461437 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
NUP50-213ENST00000461437 C21orf2O43822 256 aa20.37■□□□□ 0.85
NUP50-213ENST00000461437 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
NUP50-213ENST00000461437 DICER1Q9UPY3 1922 aaKnown RBP20.36■□□□□ 0.85
NUP50-213ENST00000461437 NFKBIEO00221 500 aa20.36■□□□□ 0.85
NUP50-213ENST00000461437 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
NUP50-213ENST00000461437 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
NUP50-213ENST00000461437 MAP3K15Q6ZN16 1313 aa20.35■□□□□ 0.85
NUP50-213ENST00000461437 GPTP24298 496 aa20.35■□□□□ 0.85
NUP50-213ENST00000461437 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
NUP50-213ENST00000461437 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
NUP50-213ENST00000461437 SRGNP10124 158 aa20.34■□□□□ 0.85
NUP50-213ENST00000461437 PDIA6Q15084 440 aa20.34■□□□□ 0.85
NUP50-213ENST00000461437 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
NUP50-213ENST00000461437 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
NUP50-213ENST00000461437 ANKRD36CQ5JPF3 1778 aa20.33■□□□□ 0.84
NUP50-213ENST00000461437 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
NUP50-213ENST00000461437 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
NUP50-213ENST00000461437 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
NUP50-213ENST00000461437 STYK1Q6J9G0 422 aa20.31■□□□□ 0.84
NUP50-213ENST00000461437 OLFM4Q6UX06 510 aa20.31■□□□□ 0.84
NUP50-213ENST00000461437 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
NUP50-213ENST00000461437 MASTLQ96GX5 879 aa20.31■□□□□ 0.84
NUP50-213ENST00000461437 CHL1O00533 1208 aa20.3■□□□□ 0.84
NUP50-213ENST00000461437 LMNB1P20700 586 aa20.3■□□□□ 0.84
NUP50-213ENST00000461437 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
NUP50-213ENST00000461437 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
NUP50-213ENST00000461437 ERVV-1B6SEH8 477 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 APAF1O14727 1248 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
NUP50-213ENST00000461437 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
NUP50-213ENST00000461437 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 CNKSR1Q969H4 720 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 RRAGCQ9HB90 399 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
NUP50-213ENST00000461437 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
NUP50-213ENST00000461437 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
NUP50-213ENST00000461437 LAMB2P55268 1798 aa20.28■□□□□ 0.84
NUP50-213ENST00000461437 ERBB4Q15303 1308 aa20.27■□□□□ 0.84
NUP50-213ENST00000461437 RGL2O15211 777 aa20.27■□□□□ 0.84
NUP50-213ENST00000461437 HSPA6P17066 643 aa20.27■□□□□ 0.84
NUP50-213ENST00000461437 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
NUP50-213ENST00000461437 NPR1P16066 1061 aa20.26■□□□□ 0.83
NUP50-213ENST00000461437 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
NUP50-213ENST00000461437 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
NUP50-213ENST00000461437 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
NUP50-213ENST00000461437 KLRG2A4D1S0 409 aaPredicted RBP20.25■□□□□ 0.83
NUP50-213ENST00000461437 C3orf67Q6ZVT6 689 aa20.25■□□□□ 0.83
NUP50-213ENST00000461437 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
NUP50-213ENST00000461437 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
NUP50-213ENST00000461437 CHPF2Q9P2E5 772 aa20.25■□□□□ 0.83
NUP50-213ENST00000461437 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
NUP50-213ENST00000461437 TAF1P21675 1872 aa20.24■□□□□ 0.83
NUP50-213ENST00000461437 NTSR2O95665 410 aa20.24■□□□□ 0.83
NUP50-213ENST00000461437 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
NUP50-213ENST00000461437 TAOK3Q9H2K8 898 aa20.24■□□□□ 0.83
NUP50-213ENST00000461437 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
NUP50-213ENST00000461437 TOMM70O94826 608 aa20.23■□□□□ 0.83
NUP50-213ENST00000461437 NYXQ9GZU5 481 aa20.23■□□□□ 0.83
NUP50-213ENST00000461437 HDGFL1Q5TGJ6 251 aa20.22■□□□□ 0.83
NUP50-213ENST00000461437 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
NUP50-213ENST00000461437 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
NUP50-213ENST00000461437 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
NUP50-213ENST00000461437 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
NUP50-213ENST00000461437 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
NUP50-213ENST00000461437 SYNE4Q8N205 404 aa20.21■□□□□ 0.83
NUP50-213ENST00000461437 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
NUP50-213ENST00000461437 TCERG1O14776 1098 aaKnown RBP20.2■□□□□ 0.82
NUP50-213ENST00000461437 CRY2Q49AN0 593 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms