RNA–Protein interactions for RNA: ENST00000461146.3

RN7SL50P-201, Transcript of RNA, 7SL, cytoplasmic 50, pseudogene, humanhuman

BASIC

Gene RN7SL50P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL50P-201ENST00000461146 CCDC88AQ3V6T2 1871 aa12.69□□□□□ -0.38
RN7SL50P-201ENST00000461146 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
RN7SL50P-201ENST00000461146 STARD3NLO95772 234 aa12.68□□□□□ -0.38
RN7SL50P-201ENST00000461146 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
RN7SL50P-201ENST00000461146 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
RN7SL50P-201ENST00000461146 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 HMOX1P09601 288 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 ZNF790Q6PG37 636 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 SNED1Q8TER0 1413 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
RN7SL50P-201ENST00000461146 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
RN7SL50P-201ENST00000461146 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
RN7SL50P-201ENST00000461146 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
RN7SL50P-201ENST00000461146 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
RN7SL50P-201ENST00000461146 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
RN7SL50P-201ENST00000461146 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
RN7SL50P-201ENST00000461146 HSPA8P11142 646 aaKnown RBP12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 LBX1P52954 281 aa12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
RN7SL50P-201ENST00000461146 SCN4AP35499 1836 aa12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 FZD9O00144 591 aa12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 A1BGP04217 495 aa12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 ABHD8Q96I13 439 aa12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
RN7SL50P-201ENST00000461146 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 RGS19P49795 217 aa12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
RN7SL50P-201ENST00000461146 RGL2O15211 777 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 KCNQ3O43525 872 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 NPR1P16066 1061 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 EPHX2P34913 555 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
RN7SL50P-201ENST00000461146 ST5P78524 1137 aa12.6□□□□□ -0.39
RN7SL50P-201ENST00000461146 WDR43Q15061 677 aaKnown RBP eCLIP12.6□□□□□ -0.39
RN7SL50P-201ENST00000461146 AIDAQ96BJ3 306 aa12.6□□□□□ -0.39
RN7SL50P-201ENST00000461146 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
RN7SL50P-201ENST00000461146 WDR33Q9C0J8 1336 aaKnown RBP12.6□□□□□ -0.39
RN7SL50P-201ENST00000461146 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 COL4A5P29400 1685 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 DEFB115Q30KQ5 88 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 MAP1SQ66K74 1059 aaPredicted RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 RNF123Q5XPI4 1314 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
RN7SL50P-201ENST00000461146 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 EAPPQ56P03 285 aaPredicted RBP12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 GPC2Q8N158 579 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 NBPF15Q8N660 670 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 PSMD1Q99460 953 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 BCORQ6W2J9 1755 aa12.58□□□□□ -0.4
RN7SL50P-201ENST00000461146 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 TEFQ10587 303 aa12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 PHACTR3Q96KR7 559 aa12.57□□□□□ -0.4
RN7SL50P-201ENST00000461146 SCNN1DP51172 638 aa12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 CST9Q5W186 159 aa12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 SYNE4Q8N205 404 aa12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
RN7SL50P-201ENST00000461146 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms