RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 TBC1D2BQ9UPU7 963 aa24.31■■□□□ 1.48
COL9A2-205ENST00000461118 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
COL9A2-205ENST00000461118 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
COL9A2-205ENST00000461118 IL6STP40189 918 aaPredicted RBP24.29■■□□□ 1.48
COL9A2-205ENST00000461118 FMNL2Q96PY5 1086 aa24.29■■□□□ 1.48
COL9A2-205ENST00000461118 C21orf2O43822 256 aa24.28■■□□□ 1.48
COL9A2-205ENST00000461118 PDE6BP35913 854 aa24.28■■□□□ 1.48
COL9A2-205ENST00000461118 TAF7Q15545 349 aaPredicted RBP24.28■■□□□ 1.48
COL9A2-205ENST00000461118 KCNQ3O43525 872 aa24.27■■□□□ 1.48
COL9A2-205ENST00000461118 CAMTA2O94983 1202 aa24.27■■□□□ 1.48
COL9A2-205ENST00000461118 A1BGP04217 495 aa24.27■■□□□ 1.48
COL9A2-205ENST00000461118 ZNF622Q969S3 477 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL9A2-205ENST00000461118 PDZRN3Q9UPQ7 1066 aa24.27■■□□□ 1.48
COL9A2-205ENST00000461118 LTBP3Q9NS15 1303 aa24.27■■□□□ 1.48
COL9A2-205ENST00000461118 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
COL9A2-205ENST00000461118 ZNF219Q9P2Y4 722 aaPredicted RBP24.25■■□□□ 1.47
COL9A2-205ENST00000461118 ERFEQ4G0M1 354 aa24.24■■□□□ 1.47
COL9A2-205ENST00000461118 ADAMTS8Q9UP79 889 aa24.24■■□□□ 1.47
COL9A2-205ENST00000461118 ZNF330Q9Y3S2 320 aaPredicted RBP24.24■■□□□ 1.47
COL9A2-205ENST00000461118 SRGNP10124 158 aa24.23■■□□□ 1.47
COL9A2-205ENST00000461118 TMPOP42166 694 aaKnown RBP24.23■■□□□ 1.47
COL9A2-205ENST00000461118 PNISRQ8TF01 805 aaKnown RBP24.23■■□□□ 1.47
COL9A2-205ENST00000461118 SCN4AP35499 1836 aa24.23■■□□□ 1.47
COL9A2-205ENST00000461118 RIPK4P57078 832 aa24.22■■□□□ 1.47
COL9A2-205ENST00000461118 DPY19L2Q6NUT2 758 aa24.22■■□□□ 1.47
COL9A2-205ENST00000461118 RUNDC1Q96C34 613 aa24.22■■□□□ 1.47
COL9A2-205ENST00000461118 USP16Q9Y5T5 823 aa24.22■■□□□ 1.47
COL9A2-205ENST00000461118 POTEIP0CG38 1075 aa24.21■■□□□ 1.47
COL9A2-205ENST00000461118 POTEJP0CG39 1038 aa24.21■■□□□ 1.47
COL9A2-205ENST00000461118 HSPA1AP0DMV8 641 aaKnown RBP24.21■■□□□ 1.47
COL9A2-205ENST00000461118 HSPA1BP0DMV9 641 aaKnown RBP24.21■■□□□ 1.47
COL9A2-205ENST00000461118 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
COL9A2-205ENST00000461118 CNBD1Q8NA66 436 aa24.21■■□□□ 1.47
COL9A2-205ENST00000461118 SETDB2Q96T68 719 aa24.21■■□□□ 1.47
COL9A2-205ENST00000461118 PRAMEF22A3QJZ6 481 aa24.2■■□□□ 1.46
COL9A2-205ENST00000461118 PRPF40BQ6NWY9 871 aaKnown RBP24.2■■□□□ 1.46
COL9A2-205ENST00000461118 C7orf43Q8WVR3 580 aa24.2■■□□□ 1.46
COL9A2-205ENST00000461118 TAOK3Q9H2K8 898 aa24.2■■□□□ 1.46
COL9A2-205ENST00000461118 DDNO94850 711 aaPredicted RBP24.19■■□□□ 1.46
COL9A2-205ENST00000461118 SNRPA1P09661 255 aaKnown RBP24.19■■□□□ 1.46
COL9A2-205ENST00000461118 PIP4K2AP48426 406 aaPredicted RBP24.19■■□□□ 1.46
COL9A2-205ENST00000461118 DZIP3Q86Y13 1208 aaKnown RBP24.19■■□□□ 1.46
COL9A2-205ENST00000461118 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
COL9A2-205ENST00000461118 TNS4Q8IZW8 715 aa24.19■■□□□ 1.46
COL9A2-205ENST00000461118 CNKSR1Q969H4 720 aa24.19■■□□□ 1.46
COL9A2-205ENST00000461118 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
COL9A2-205ENST00000461118 MIS18AQ9NYP9 233 aa24.19■■□□□ 1.46
COL9A2-205ENST00000461118 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
COL9A2-205ENST00000461118 ADAMTSL1Q8N6G6 1762 aa24.17■■□□□ 1.46
COL9A2-205ENST00000461118 MASTLQ96GX5 879 aa24.17■■□□□ 1.46
COL9A2-205ENST00000461118 CHADLQ6NUI6 762 aa24.16■■□□□ 1.46
COL9A2-205ENST00000461118 LAMB4A4D0S4 1761 aa24.16■■□□□ 1.46
COL9A2-205ENST00000461118 KDM3BQ7LBC6 1761 aa24.16■■□□□ 1.46
COL9A2-205ENST00000461118 ST5P78524 1137 aa24.15■■□□□ 1.46
COL9A2-205ENST00000461118 BABAM1Q9NWV8 329 aa24.15■■□□□ 1.46
COL9A2-205ENST00000461118 KLRG2A4D1S0 409 aaPredicted RBP24.14■■□□□ 1.45
COL9A2-205ENST00000461118 ANP32CO43423 234 aa24.14■■□□□ 1.45
COL9A2-205ENST00000461118 CAPN15O75808 1086 aa24.14■■□□□ 1.45
COL9A2-205ENST00000461118 CLEC4GQ6UXB4 293 aa24.14■■□□□ 1.45
COL9A2-205ENST00000461118 CREBZFQ9NS37 354 aa24.14■■□□□ 1.45
COL9A2-205ENST00000461118 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
COL9A2-205ENST00000461118 NUP98P52948 1817 aa24.13■■□□□ 1.45
COL9A2-205ENST00000461118 NBPF26B4DH59 902 aa24.13■■□□□ 1.45
COL9A2-205ENST00000461118 EIF4A1P60842 406 aaKnown RBP24.13■■□□□ 1.45
COL9A2-205ENST00000461118 NBPF10Q6P3W6 841 aaKnown RBP24.13■■□□□ 1.45
COL9A2-205ENST00000461118 NBPF15Q8N660 670 aa24.13■■□□□ 1.45
COL9A2-205ENST00000461118 PASKQ96RG2 1323 aa24.12■■□□□ 1.45
COL9A2-205ENST00000461118 CCDC184Q52MB2 194 aa24.12■■□□□ 1.45
COL9A2-205ENST00000461118 SOGA3Q5TF21 947 aa24.12■■□□□ 1.45
COL9A2-205ENST00000461118 L3MBTL3Q96JM7 780 aaPredicted RBP24.12■■□□□ 1.45
COL9A2-205ENST00000461118 TRIM35Q9UPQ4 493 aa24.12■■□□□ 1.45
COL9A2-205ENST00000461118 NEUROD2Q15784 382 aa24.11■■□□□ 1.45
COL9A2-205ENST00000461118 NPM2Q86SE8 214 aaKnown RBP24.1■■□□□ 1.45
COL9A2-205ENST00000461118 NBPF5PQ86XG9 351 aaPredicted RBP24.1■■□□□ 1.45
COL9A2-205ENST00000461118 SNED1Q8TER0 1413 aa24.1■■□□□ 1.45
COL9A2-205ENST00000461118 NPHP1O15259 732 aa24.09■■□□□ 1.45
COL9A2-205ENST00000461118 OLFM4Q6UX06 510 aa24.09■■□□□ 1.45
COL9A2-205ENST00000461118 MKRN1Q9UHC7 482 aaKnown RBP24.09■■□□□ 1.45
COL9A2-205ENST00000461118 TSPYL4Q9UJ04 414 aa24.09■■□□□ 1.45
COL9A2-205ENST00000461118 RGL2O15211 777 aa24.08■■□□□ 1.45
COL9A2-205ENST00000461118 NPR1P16066 1061 aa24.08■■□□□ 1.45
COL9A2-205ENST00000461118 CCDC93Q567U6 631 aa24.08■■□□□ 1.45
COL9A2-205ENST00000461118 TAF1DQ9H5J8 278 aaPredicted RBP24.08■■□□□ 1.45
COL9A2-205ENST00000461118 ZNF541Q9H0D2 1346 aa24.08■■□□□ 1.44
COL9A2-205ENST00000461118 CNTNAP1P78357 1384 aa24.06■■□□□ 1.44
COL9A2-205ENST00000461118 CHL1O00533 1208 aa24.06■■□□□ 1.44
COL9A2-205ENST00000461118 ITGBL1O95965 494 aaPredicted RBP24.06■■□□□ 1.44
COL9A2-205ENST00000461118 FKBP4Q02790 459 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL9A2-205ENST00000461118 LDHDQ86WU2 507 aa24.06■■□□□ 1.44
COL9A2-205ENST00000461118 IQCA1LA6NCM1 817 aa24.05■■□□□ 1.44
COL9A2-205ENST00000461118 APAF1O14727 1248 aa24.05■■□□□ 1.44
COL9A2-205ENST00000461118 HLFQ16534 295 aa24.05■■□□□ 1.44
COL9A2-205ENST00000461118 ZNF277Q9NRM2 450 aaPredicted RBP24.05■■□□□ 1.44
COL9A2-205ENST00000461118 NIP7Q9Y221 180 aaKnown RBP eCLIP24.05■■□□□ 1.44
COL9A2-205ENST00000461118 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
COL9A2-205ENST00000461118 COL4A5P29400 1685 aa24.05■■□□□ 1.44
COL9A2-205ENST00000461118 TPTE2Q6XPS3 522 aa24.04■■□□□ 1.44
COL9A2-205ENST00000461118 MRS2Q9HD23 443 aa24.03■■□□□ 1.44
COL9A2-205ENST00000461118 LTBP1Q14766 1721 aa24.03■■□□□ 1.44
COL9A2-205ENST00000461118 FZD9O00144 591 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms