RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 NR6A1Q15406 480 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
PTPN12-209ENST00000460731 LYSMD3Q7Z3D4 306 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 ESF1Q9H501 851 aaKnown RBP8.3□□□□□ -1.08
PTPN12-209ENST00000460731 ENAMQ9NRM1 1142 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 MBIPQ9NS73 344 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 DHX57Q6P158 1386 aaKnown RBP8.3□□□□□ -1.08
PTPN12-209ENST00000460731 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 CLTCQ00610 1675 aaKnown RBP8.3□□□□□ -1.08
PTPN12-209ENST00000460731 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
PTPN12-209ENST00000460731 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 CAMSAP1Q5T5Y3 1602 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 ESPNB1AK53 854 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 ZNF837Q96EG3 531 aaPredicted RBP8.29□□□□□ -1.08
PTPN12-209ENST00000460731 SLC52A1Q9NWF4 448 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 ERVK-7P63135 1459 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 E9PCH4 1651 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 CEP152O94986 1710 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
PTPN12-209ENST00000460731 C3P01024 1663 aa8.28□□□□□ -1.08
PTPN12-209ENST00000460731 PHF20L1A8MW92 1017 aa8.28□□□□□ -1.08
PTPN12-209ENST00000460731 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
PTPN12-209ENST00000460731 CEBPAP49715 358 aaPredicted RBP8.28□□□□□ -1.08
PTPN12-209ENST00000460731 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
PTPN12-209ENST00000460731 IDI1Q13907 227 aa8.27□□□□□ -1.09
PTPN12-209ENST00000460731 BEND7Q8N7W2 519 aaPredicted RBP8.27□□□□□ -1.09
PTPN12-209ENST00000460731 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
PTPN12-209ENST00000460731 RIMS1Q86UR5 1692 aaKnown RBP8.27□□□□□ -1.09
PTPN12-209ENST00000460731 TNRQ92752 1358 aa8.26□□□□□ -1.09
PTPN12-209ENST00000460731 BCRP11274 1271 aa8.26□□□□□ -1.09
PTPN12-209ENST00000460731 DBN1Q16643 649 aa8.26□□□□□ -1.09
PTPN12-209ENST00000460731 NLRP1Q9C000 1473 aa8.26□□□□□ -1.09
PTPN12-209ENST00000460731 PIK3C2BO00750 1634 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 TRPM2O94759 1503 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 PREX1Q8TCU6 1659 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 ACDQ96AP0 544 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 SYNMO15061 1565 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
PTPN12-209ENST00000460731 CFAP65Q6ZU64 1925 aaKnown RBP8.25□□□□□ -1.09
PTPN12-209ENST00000460731 PRICKLE2Q7Z3G6 844 aa8.24□□□□□ -1.09
PTPN12-209ENST00000460731 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
PTPN12-209ENST00000460731 SPATA31E1Q6ZUB1 1445 aa8.23□□□□□ -1.09
PTPN12-209ENST00000460731 GPR25O00155 361 aa8.23□□□□□ -1.09
PTPN12-209ENST00000460731 RHOQP17081 205 aa8.23□□□□□ -1.09
PTPN12-209ENST00000460731 GPC1P35052 558 aa8.23□□□□□ -1.09
PTPN12-209ENST00000460731 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPN12-209ENST00000460731 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
PTPN12-209ENST00000460731 A2ML1A8K2U0 1454 aa8.22□□□□□ -1.09
PTPN12-209ENST00000460731 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
PTPN12-209ENST00000460731 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
PTPN12-209ENST00000460731 DYRK1BQ9Y463 629 aa8.22□□□□□ -1.09
PTPN12-209ENST00000460731 RAB15P59190 212 aa8.21□□□□□ -1.1
PTPN12-209ENST00000460731 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
PTPN12-209ENST00000460731 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
PTPN12-209ENST00000460731 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
PTPN12-209ENST00000460731 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.1
PTPN12-209ENST00000460731 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.1
PTPN12-209ENST00000460731 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 ARHGAP23Q9P227 1491 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 PODNQ7Z5L7 613 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
PTPN12-209ENST00000460731 THEMISQ8N1K5 641 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-209ENST00000460731 NEDD1Q8NHV4 660 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 TMEM131LA2VDJ0 1609 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 ZFYVE9O95405 1425 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 UHRF1BP1Q6BDS2 1440 aa8.2□□□□□ -1.1
PTPN12-209ENST00000460731 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 SLIT1O75093 1534 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 UGGT1Q9NYU2 1555 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 CLTCL1P53675 1640 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 ZNF142P52746 1687 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-209ENST00000460731 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-209ENST00000460731 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
PTPN12-209ENST00000460731 CYLDQ9NQC7 956 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 ADGRB3O60242 1522 aa8.19□□□□□ -1.1
PTPN12-209ENST00000460731 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-209ENST00000460731 MYO3AQ8NEV4 1616 aa8.18□□□□□ -1.1
PTPN12-209ENST00000460731 H7C1W4 665 aa8.18□□□□□ -1.1
PTPN12-209ENST00000460731 OIP5O43482 229 aa8.18□□□□□ -1.1
PTPN12-209ENST00000460731 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
PTPN12-209ENST00000460731 SIN3AQ96ST3 1273 aa8.18□□□□□ -1.1
PTPN12-209ENST00000460731 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-209ENST00000460731 UBR1Q8IWV7 1749 aa8.17□□□□□ -1.1
PTPN12-209ENST00000460731 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
PTPN12-209ENST00000460731 K7ELQ4 463 aaPredicted RBP8.17□□□□□ -1.1
PTPN12-209ENST00000460731 RIPOR1Q6ZS17 1223 aa8.17□□□□□ -1.1
PTPN12-209ENST00000460731 SLC24A3Q9HC58 644 aa8.17□□□□□ -1.1
PTPN12-209ENST00000460731 A0A1W2PRU2 124 aa8.16□□□□□ -1.1
PTPN12-209ENST00000460731 KRBA1A5PL33 1030 aa8.16□□□□□ -1.1
PTPN12-209ENST00000460731 MED14O60244 1454 aa8.16□□□□□ -1.1
PTPN12-209ENST00000460731 LTKP29376 864 aa8.16□□□□□ -1.1
PTPN12-209ENST00000460731 SNRPNP63162 240 aaKnown RBP8.16□□□□□ -1.1
PTPN12-209ENST00000460731 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms