RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
FAM228B-201ENST00000460686 DPYDQ12882 1025 aa9.52□□□□□ -0.89
FAM228B-201ENST00000460686 PTK7Q13308 1070 aa9.52□□□□□ -0.89
FAM228B-201ENST00000460686 CHMP7Q8WUX9 453 aaPredicted RBP9.52□□□□□ -0.89
FAM228B-201ENST00000460686 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
FAM228B-201ENST00000460686 DNMT3AQ9Y6K1 912 aaPredicted RBP9.52□□□□□ -0.89
FAM228B-201ENST00000460686 GSK3AP49840 483 aa9.51□□□□□ -0.89
FAM228B-201ENST00000460686 SAMD5Q5TGI4 173 aa9.51□□□□□ -0.89
FAM228B-201ENST00000460686 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
FAM228B-201ENST00000460686 SCG3Q8WXD2 468 aaKnown RBP9.51□□□□□ -0.89
FAM228B-201ENST00000460686 PHACTR1Q9C0D0 580 aa9.51□□□□□ -0.89
FAM228B-201ENST00000460686 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
FAM228B-201ENST00000460686 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
FAM228B-201ENST00000460686 PHF20L1A8MW92 1017 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 SHISA8B8ZZ34 492 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 LGR5O75473 907 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 AMPD1P23109 780 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 C1orf229Q6ZS94 237 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-201ENST00000460686 ANKMY2Q8IV38 441 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 BEND7Q8N7W2 519 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-201ENST00000460686 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 PRR12Q9ULL5 1215 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
FAM228B-201ENST00000460686 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 NEURL1BA8MQ27 555 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 ARAFP10398 606 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 RFX1P22670 979 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 SLCO4C1Q6ZQN7 724 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 MARK1Q9P0L2 795 aa9.49□□□□□ -0.89
FAM228B-201ENST00000460686 C21orf2O43822 256 aa9.48□□□□□ -0.89
FAM228B-201ENST00000460686 HIRAP54198 1017 aaPredicted RBP9.48□□□□□ -0.89
FAM228B-201ENST00000460686 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
FAM228B-201ENST00000460686 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
FAM228B-201ENST00000460686 ADH6P28332 368 aa9.47□□□□□ -0.89
FAM228B-201ENST00000460686 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
FAM228B-201ENST00000460686 HSH2DQ96JZ2 352 aa9.47□□□□□ -0.89
FAM228B-201ENST00000460686 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
FAM228B-201ENST00000460686 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
FAM228B-201ENST00000460686 EFSO43281 561 aa9.46□□□□□ -0.9
FAM228B-201ENST00000460686 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
FAM228B-201ENST00000460686 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
FAM228B-201ENST00000460686 PCBP4P57723 403 aaKnown RBP9.45□□□□□ -0.9
FAM228B-201ENST00000460686 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
FAM228B-201ENST00000460686 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
FAM228B-201ENST00000460686 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
FAM228B-201ENST00000460686 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
FAM228B-201ENST00000460686 C2orf49Q9BVC5 232 aaPredicted RBP9.45□□□□□ -0.9
FAM228B-201ENST00000460686 ZMYND15Q9H091 742 aa9.45□□□□□ -0.9
FAM228B-201ENST00000460686 EPXP11678 715 aa9.44□□□□□ -0.9
FAM228B-201ENST00000460686 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
FAM228B-201ENST00000460686 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
FAM228B-201ENST00000460686 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
FAM228B-201ENST00000460686 MKL2Q9ULH7 1088 aa9.44□□□□□ -0.9
FAM228B-201ENST00000460686 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
FAM228B-201ENST00000460686 ZNF468Q5VIY5 522 aaPredicted RBP9.43□□□□□ -0.9
FAM228B-201ENST00000460686 ZNF280CQ8ND82 737 aa9.43□□□□□ -0.9
FAM228B-201ENST00000460686 ARXQ96QS3 562 aa9.43□□□□□ -0.9
FAM228B-201ENST00000460686 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
FAM228B-201ENST00000460686 AVENQ9NQS1 362 aaPredicted RBP9.43□□□□□ -0.9
FAM228B-201ENST00000460686 IGFBP4P22692 258 aa9.42□□□□□ -0.9
FAM228B-201ENST00000460686 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
FAM228B-201ENST00000460686 KLF15Q9UIH9 416 aa9.42□□□□□ -0.9
FAM228B-201ENST00000460686 GRIN2CQ14957 1233 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 HIF1AQ16665 826 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
FAM228B-201ENST00000460686 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
FAM228B-201ENST00000460686 TYRO3Q06418 890 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 SPEM2Q0P670 501 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 RTN1Q16799 776 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 SLC30A3Q99726 388 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 KCNH4Q9UQ05 1017 aa9.39□□□□□ -0.91
FAM228B-201ENST00000460686 RAB44Q7Z6P3 723 aaPredicted RBP9.38□□□□□ -0.91
FAM228B-201ENST00000460686 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
FAM228B-201ENST00000460686 PIK3R2O00459 728 aa9.37□□□□□ -0.91
FAM228B-201ENST00000460686 ALAS2P22557 587 aa9.37□□□□□ -0.91
FAM228B-201ENST00000460686 BTLAQ7Z6A9 289 aa9.37□□□□□ -0.91
FAM228B-201ENST00000460686 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
FAM228B-201ENST00000460686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
FAM228B-201ENST00000460686 FOXO3O43524 673 aa9.36□□□□□ -0.91
FAM228B-201ENST00000460686 WEE1P30291 646 aa9.36□□□□□ -0.91
FAM228B-201ENST00000460686 ELOA3CA0A087WX78 387 aaPredicted RBP9.35□□□□□ -0.91
FAM228B-201ENST00000460686 ELOA3DA6NLF2 546 aaPredicted RBP9.35□□□□□ -0.91
FAM228B-201ENST00000460686 GNB5O14775 395 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 SIN3BO75182 1162 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 DGKGP49619 791 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 ELOA3BQ3SY89 546 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 LINC00114Q6XXX2 140 aa9.35□□□□□ -0.91
FAM228B-201ENST00000460686 ELOA3Q8NG57 546 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms