RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 KDM3BQ7LBC6 1761 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 EP400Q96L91 3159 aa14.03□□□□□ -0.16
SMNDC1-203ENST00000460483 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
SMNDC1-203ENST00000460483 RARSP54136 660 aaKnown RBP14.03□□□□□ -0.16
SMNDC1-203ENST00000460483 KCNQ4P56696 695 aa14.03□□□□□ -0.16
SMNDC1-203ENST00000460483 LHX8Q68G74 356 aa14.03□□□□□ -0.16
SMNDC1-203ENST00000460483 KAT6BQ8WYB5 2073 aa14.02□□□□□ -0.16
SMNDC1-203ENST00000460483 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.16
SMNDC1-203ENST00000460483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 CLCN6P51797 869 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 FKBP5Q13451 457 aaPredicted RBP14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 CLEC4GQ6UXB4 293 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 RIC3Q7Z5B4 369 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 DZIP3Q86Y13 1208 aaKnown RBP14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 API5Q9BZZ5 524 aaKnown RBP14.02□□□□□ -0.17
SMNDC1-203ENST00000460483 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 PHF14O94880 888 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 FLIIQ13045 1269 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 NLGN1Q8N2Q7 840 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 PLBD2Q8NHP8 589 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 SSH1Q8WYL5 1049 aa14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
SMNDC1-203ENST00000460483 COL15A1P39059 1388 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 NBPF26B4DH59 902 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
SMNDC1-203ENST00000460483 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
SMNDC1-203ENST00000460483 NBPF15Q8N660 670 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 NARFQ9UHQ1 456 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 LY75O60449 1722 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 C5P01031 1676 aa14□□□□□ -0.17
SMNDC1-203ENST00000460483 HSP90B1P14625 803 aaKnown RBP13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 PDIA6Q15084 440 aa13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 ARHGEF1Q92888 912 aaKnown RBP13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 CHMP4BQ9H444 224 aaKnown RBP13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
SMNDC1-203ENST00000460483 MAP3K15Q6ZN16 1313 aa13.98□□□□□ -0.17
SMNDC1-203ENST00000460483 ZNF827Q17R98 1081 aa13.98□□□□□ -0.17
SMNDC1-203ENST00000460483 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
SMNDC1-203ENST00000460483 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
SMNDC1-203ENST00000460483 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
SMNDC1-203ENST00000460483 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
SMNDC1-203ENST00000460483 TBC1D2BQ9UPU7 963 aa13.97□□□□□ -0.17
SMNDC1-203ENST00000460483 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 GIGYF2Q6Y7W6 1299 aaKnown RBP13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 BCL2L13Q9BXK5 485 aa13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.17
SMNDC1-203ENST00000460483 PI4KAP2A4QPH2 592 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 NPHP1O15259 732 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 ANXA1P04083 346 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 POLD1P28340 1107 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 PIP4K2AP48426 406 aaPredicted RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 R3HDM1Q15032 1099 aaKnown RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 PI4KAP1Q8N8J0 262 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 NYXQ9GZU5 481 aa13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 PHAXQ9H814 394 aaKnown RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
SMNDC1-203ENST00000460483 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 TCIRG1Q13488 830 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 LRP10Q7Z4F1 713 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 ZBTB3Q9H5J0 574 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 MAP3K2Q9Y2U5 619 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
SMNDC1-203ENST00000460483 RNF123Q5XPI4 1314 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 TJP1Q07157 1748 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 BCAR3O75815 825 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 LINS1Q8NG48 757 aa13.93□□□□□ -0.18
SMNDC1-203ENST00000460483 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms