RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 KCNQ3O43525 872 aa13.98□□□□□ -0.17
HDLBP-227ENST00000458564 COL13A1Q5TAT6 717 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-227ENST00000458564 PRPF40BQ6NWY9 871 aaKnown RBP13.98□□□□□ -0.17
HDLBP-227ENST00000458564 DZIP3Q86Y13 1208 aaKnown RBP13.98□□□□□ -0.17
HDLBP-227ENST00000458564 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
HDLBP-227ENST00000458564 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
HDLBP-227ENST00000458564 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
HDLBP-227ENST00000458564 USP16Q9Y5T5 823 aa13.97□□□□□ -0.17
HDLBP-227ENST00000458564 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
HDLBP-227ENST00000458564 KLRG2A4D1S0 409 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-227ENST00000458564 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
HDLBP-227ENST00000458564 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
HDLBP-227ENST00000458564 NUDCQ9Y266 331 aa13.96□□□□□ -0.17
HDLBP-227ENST00000458564 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
HDLBP-227ENST00000458564 NPHP1O15259 732 aa13.95□□□□□ -0.18
HDLBP-227ENST00000458564 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-227ENST00000458564 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
HDLBP-227ENST00000458564 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
HDLBP-227ENST00000458564 NBPF5PQ86XG9 351 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-227ENST00000458564 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
HDLBP-227ENST00000458564 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-227ENST00000458564 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
HDLBP-227ENST00000458564 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
HDLBP-227ENST00000458564 NPR1P16066 1061 aa13.93□□□□□ -0.18
HDLBP-227ENST00000458564 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-227ENST00000458564 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-227ENST00000458564 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
HDLBP-227ENST00000458564 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
HDLBP-227ENST00000458564 MCM10Q7L590 875 aa13.93□□□□□ -0.18
HDLBP-227ENST00000458564 CREBZFQ9NS37 354 aa13.93□□□□□ -0.18
HDLBP-227ENST00000458564 IQCA1LA6NCM1 817 aa13.92□□□□□ -0.18
HDLBP-227ENST00000458564 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
HDLBP-227ENST00000458564 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-227ENST00000458564 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-227ENST00000458564 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
HDLBP-227ENST00000458564 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDLBP-227ENST00000458564 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
HDLBP-227ENST00000458564 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
HDLBP-227ENST00000458564 CACNA1SQ13698 1873 aa13.91□□□□□ -0.18
HDLBP-227ENST00000458564 FKBP4Q02790 459 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■□□□ 12.8
HDLBP-227ENST00000458564 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
HDLBP-227ENST00000458564 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
HDLBP-227ENST00000458564 NIP7Q9Y221 180 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDLBP-227ENST00000458564 SCN4AP35499 1836 aa13.91□□□□□ -0.18
HDLBP-227ENST00000458564 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
HDLBP-227ENST00000458564 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
HDLBP-227ENST00000458564 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
HDLBP-227ENST00000458564 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
HDLBP-227ENST00000458564 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
HDLBP-227ENST00000458564 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
HDLBP-227ENST00000458564 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
HDLBP-227ENST00000458564 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-227ENST00000458564 RTKN2Q8IZC4 609 aa13.89□□□□□ -0.19
HDLBP-227ENST00000458564 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-227ENST00000458564 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
HDLBP-227ENST00000458564 CNTNAP1P78357 1384 aa13.88□□□□□ -0.19
HDLBP-227ENST00000458564 CRY2Q49AN0 593 aa13.88□□□□□ -0.19
HDLBP-227ENST00000458564 ZNF541Q9H0D2 1346 aa13.88□□□□□ -0.19
HDLBP-227ENST00000458564 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-227ENST00000458564 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
HDLBP-227ENST00000458564 ADAMTSL1Q8N6G6 1762 aa13.87□□□□□ -0.19
HDLBP-227ENST00000458564 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
HDLBP-227ENST00000458564 ALDH1B1P30837 517 aa13.87□□□□□ -0.19
HDLBP-227ENST00000458564 HLFQ16534 295 aa13.87□□□□□ -0.19
HDLBP-227ENST00000458564 ZNF277Q9NRM2 450 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-227ENST00000458564 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
HDLBP-227ENST00000458564 FZD9O00144 591 aa13.86□□□□□ -0.19
HDLBP-227ENST00000458564 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
HDLBP-227ENST00000458564 PSMD1Q99460 953 aa13.86□□□□□ -0.19
HDLBP-227ENST00000458564 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
HDLBP-227ENST00000458564 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
HDLBP-227ENST00000458564 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-227ENST00000458564 IARSP41252 1262 aaKnown RBP13.85□□□□□ -0.19
HDLBP-227ENST00000458564 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
HDLBP-227ENST00000458564 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
HDLBP-227ENST00000458564 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
HDLBP-227ENST00000458564 MAP3K15Q6ZN16 1313 aa13.85□□□□□ -0.19
HDLBP-227ENST00000458564 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-227ENST00000458564 TMEM88BA6NKF7 163 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 NEFMP07197 916 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-227ENST00000458564 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-227ENST00000458564 EPHX2P34913 555 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
HDLBP-227ENST00000458564 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 GPC2Q8N158 579 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 SYNE4Q8N205 404 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 ERBB4Q15303 1308 aa13.83□□□□□ -0.2
HDLBP-227ENST00000458564 CAPN15O75808 1086 aa13.82□□□□□ -0.2
HDLBP-227ENST00000458564 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
HDLBP-227ENST00000458564 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
HDLBP-227ENST00000458564 UBN2Q6ZU65 1347 aa13.82□□□□□ -0.2
HDLBP-227ENST00000458564 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
HDLBP-227ENST00000458564 NUP98P52948 1817 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
HDLBP-227ENST00000458564 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-227ENST00000458564 TTLL7Q6ZT98 887 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms