RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 COL19A1Q14993 1142 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 SEPT12Q8IYM1 358 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 ZNF784Q8NCA9 323 aaPredicted RBP6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 MORC4Q8TE76 937 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 DHX38Q92620 1227 aaKnown RBP6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 SPACA7Q96KW9 195 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 ASB16Q96NS5 453 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 DNMT3LQ9UJW3 386 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 CHD1O14646 1710 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 NUP160Q12769 1436 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 SUPT6HQ7KZ85 1726 aaKnown RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 FAM196BA6NMK8 535 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 GIGYF1O75420 1035 aaPredicted RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 ADD1P35611 737 aaKnown RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 VEGFBP49765 207 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 ANAPC15P60006 121 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 SLC43A3Q8NBI5 491 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 TINF2Q9BSI4 451 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 NLRP2Q9NX02 1062 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 PCDHB9Q9Y5E1 797 aa6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 PCF11O94913 1555 aaKnown RBP6.51□□□□□ -1.37
SPARCL1-204ENST00000458304 EHBP1L1Q8N3D4 1523 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 MAPK1P28482 360 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 GTF2F1P35269 517 aaKnown RBP eCLIP6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 RAB15P59190 212 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 PSME1Q06323 249 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 FAM69CQ0P6D2 419 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 HSP90AB4PQ58FF6 505 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 PPARGC1BQ86YN6 1023 aaKnown RBP6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 TEX2Q8IWB9 1127 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 ZSCAN29Q8IWY8 852 aaPredicted RBP6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 AGBL1Q96MI9 1066 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 BRINP2Q9C0B6 783 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 EGFL7Q9UHF1 273 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 RAPGEF6Q8TEU7 1601 aa6.5□□□□□ -1.37
SPARCL1-204ENST00000458304 CEP170Q5SW79 1584 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 TTLL8A6PVC2 850 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 MAN1A2O60476 641 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 PARNO95453 639 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 ADH1AP07327 375 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 EIF4G2P78344 907 aaKnown RBP eCLIP6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 EAPPQ56P03 285 aaPredicted RBP6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 NT5DC4Q86YG4 428 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 NFATC2IPQ8NCF5 419 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 ZCRB1Q8TBF4 217 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 SLC16A10Q8TF71 515 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 VTI1AQ96AJ9 217 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 NOP58Q9Y2X3 529 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 ERBB4Q15303 1308 aa6.49□□□□□ -1.37
SPARCL1-204ENST00000458304 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L15C9J2P7 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L10C9JJH3 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L13C9JLJ4 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L12C9JPN9 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L11C9JVI0 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L21D6R901 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L18D6R9N7 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L22D6RA61 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L17D6RBQ6 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L19D6RCP7 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L20D6RJB6 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 PEX14O75381 377 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 MAP4K4O95819 1239 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 RELBQ01201 579 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L24Q0WX57 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 HSP90AB2PQ58FF8 381 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L2Q6R6M4 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 C1orf216Q8TAB5 229 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-204ENST00000458304 HMGB1P1B2RPK0 211 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 H3BRB1 525 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 SETQ01105 290 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 PLEKHM2Q8IWE5 1019 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 TGIF2Q9GZN2 237 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 PIF1Q9H611 641 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 TUT1Q9H6E5 874 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 CCSER2Q9H7U1 834 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 DCTN4Q9UJW0 460 aa6.47□□□□□ -1.37
SPARCL1-204ENST00000458304 CCNB3Q8WWL7 1395 aa6.46□□□□□ -1.37
SPARCL1-204ENST00000458304 CCDC194A0A1B0GVG4 234 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 PPFIA3O75145 1194 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 ABL1P00519 1130 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 PTPRGP23470 1445 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 GMPRP36959 345 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 PTGIRP43119 386 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 CTSOP43234 321 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 TCEAL1Q15170 157 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms