RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CGNQ9P2M7 1197 aaKnown RBP22.73■■□□□ 1.23
SNX27-204ENST00000458013 SLC5A1P13866 664 aa22.73■■□□□ 1.23
SNX27-204ENST00000458013 MICU3Q86XE3 530 aa22.73■■□□□ 1.23
SNX27-204ENST00000458013 INCENPQ9NQS7 918 aa22.73■■□□□ 1.23
SNX27-204ENST00000458013 ANXA1P04083 346 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 NOP2P46087 812 aaKnown RBP22.72■■□□□ 1.23
SNX27-204ENST00000458013 CUL5Q93034 780 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 SLC26A6Q9BXS9 759 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 CCDC194A0A1B0GVG4 234 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 MAP3K12Q12852 859 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 RGS22Q8NE09 1264 aa22.72■■□□□ 1.23
SNX27-204ENST00000458013 GIMAP6Q6P9H5 292 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 IPO4Q8TEX9 1081 aaKnown RBP22.71■■□□□ 1.23
SNX27-204ENST00000458013 RPGRQ92834 1020 aaKnown RBP22.71■■□□□ 1.23
SNX27-204ENST00000458013 PRC1O43663 620 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 IDEP14735 1019 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 CCDC40Q4G0X9 1142 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 ANKLE2Q86XL3 938 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 DRC1Q96MC2 740 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 TBC1D9Q6ZT07 1266 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 FERMT2Q96AC1 680 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 WWC3Q9ULE0 1092 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 SAMM50Q9Y512 469 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 TMEM67Q5HYA8 995 aa22.71■■□□□ 1.23
SNX27-204ENST00000458013 RRP9O43818 475 aaKnown RBP22.7■■□□□ 1.23
SNX27-204ENST00000458013 YEATS4O95619 227 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 TMEM266Q2M3C6 531 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 CTR9Q6PD62 1173 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 CEP63Q96MT8 703 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 JADE2Q9NQC1 790 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 A0A087WZG4 1122 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 COMMD10Q9Y6G5 202 aa22.7■■□□□ 1.22
SNX27-204ENST00000458013 AFMP43652 599 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 LIMCH1Q9UPQ0 1083 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 IGHDP01880 384 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 CATIPQ7Z7H3 387 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 TCEANC2Q96MN5 208 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
SNX27-204ENST00000458013 SPECC1Q5M775 1068 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 ANKRD18BA2A2Z9 1011 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 CETN2P41208 172 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 DNAAF4Q8WXU2 420 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 IQSEC3Q9UPP2 1182 aaPredicted RBP22.68■■□□□ 1.22
SNX27-204ENST00000458013 CA8P35219 290 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 DAPK1P53355 1430 aa22.68■■□□□ 1.22
SNX27-204ENST00000458013 IQCA1Q86XH1 822 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 NKTRP30414 1462 aaKnown RBP22.67■■□□□ 1.22
SNX27-204ENST00000458013 MAP9Q49MG5 647 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 ZNF652Q9Y2D9 606 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 LMAN1P49257 510 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 SYCP3Q8IZU3 236 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 CCDC150Q8NCX0 1101 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
SNX27-204ENST00000458013 USO1O60763 962 aaKnown RBP22.67■■□□□ 1.22
SNX27-204ENST00000458013 TRIM27P14373 513 aa22.66■■□□□ 1.22
SNX27-204ENST00000458013 F8W031 263 aaPredicted RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 PAIP2Q9BPZ3 127 aaKnown RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 SCAND2PQ9GZW5 306 aaPredicted RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 SNW1Q13573 536 aaKnown RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 GBP3Q9H0R5 595 aa22.66■■□□□ 1.22
SNX27-204ENST00000458013 CNPY2Q9Y2B0 182 aa22.66■■□□□ 1.22
SNX27-204ENST00000458013 CDK13Q14004 1512 aaKnown RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 TRIM21P19474 475 aaKnown RBP22.66■■□□□ 1.22
SNX27-204ENST00000458013 STX6O43752 255 aa22.66■■□□□ 1.22
SNX27-204ENST00000458013 STX1AQ16623 288 aa22.66■■□□□ 1.22
SNX27-204ENST00000458013 CEP135Q66GS9 1140 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 TMEM110-MUSTN1A8MSY1 372 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 GCOM1H8Y6P7 765 aaPredicted RBP22.65■■□□□ 1.22
SNX27-204ENST00000458013 MYZAPP0CAP1 466 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 ZNF287Q9HBT7 754 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 VPS36Q86VN1 386 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 ZSCAN23Q3MJ62 389 aa22.65■■□□□ 1.22
SNX27-204ENST00000458013 PAFAH1B1P43034 410 aa22.64■■□□□ 1.22
SNX27-204ENST00000458013 CCDC12Q8WUD4 166 aaPredicted RBP22.64■■□□□ 1.22
SNX27-204ENST00000458013 GJC1P36383 396 aa22.64■■□□□ 1.21
SNX27-204ENST00000458013 METAP2P50579 478 aaKnown RBP eCLIP22.64■■□□□ 1.21
SNX27-204ENST00000458013 HOOK3Q86VS8 718 aa22.64■■□□□ 1.21
SNX27-204ENST00000458013 PLCD3Q8N3E9 789 aa22.64■■□□□ 1.21
SNX27-204ENST00000458013 SH2B1Q9NRF2 756 aaPredicted RBP22.64■■□□□ 1.21
SNX27-204ENST00000458013 TSPY2A6NKD2 308 aa22.64■■□□□ 1.21
SNX27-204ENST00000458013 BICD1Q96G01 975 aa22.63■■□□□ 1.21
SNX27-204ENST00000458013 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
SNX27-204ENST00000458013 NAIPQ13075 1403 aa22.63■■□□□ 1.21
SNX27-204ENST00000458013 SMC1AQ14683 1233 aaKnown RBP22.63■■□□□ 1.21
SNX27-204ENST00000458013 CALML4Q96GE6 196 aa22.63■■□□□ 1.21
SNX27-204ENST00000458013 KAT14Q9H8E8 782 aa22.63■■□□□ 1.21
SNX27-204ENST00000458013 DDX46Q7L014 1031 aaKnown RBP22.62■■□□□ 1.21
SNX27-204ENST00000458013 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
SNX27-204ENST00000458013 PTGS1P23219 599 aa22.62■■□□□ 1.21
SNX27-204ENST00000458013 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.62■■□□□ 1.21
SNX27-204ENST00000458013 V9GYY5 206 aaPredicted RBP22.62■■□□□ 1.21
SNX27-204ENST00000458013 ALS2CR12Q96Q35 445 aa22.62■■□□□ 1.21
SNX27-204ENST00000458013 CCDC196A0A1B0GTZ2 297 aa22.62■■□□□ 1.21
SNX27-204ENST00000458013 SMARCC1Q92922 1105 aaPredicted RBP22.61■■□□□ 1.21
SNX27-204ENST00000458013 FOXO3O43524 673 aa22.61■■□□□ 1.21
SNX27-204ENST00000458013 BAG4O95429 457 aaKnown RBP22.61■■□□□ 1.21
SNX27-204ENST00000458013 FEZ1Q99689 392 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms