RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 KDM2BQ8NHM5 1336 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 A0A0G2JS52 829 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 GNAI3P08754 354 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 MYT1Q01538 1121 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 PDIA6Q15084 440 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 KSR2Q6VAB6 950 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 G2E3Q7L622 706 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 DNAAF4Q8WXU2 420 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
CDC42EP3-204ENST00000457889 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 ALDH1L1O75891 902 aa11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
CDC42EP3-204ENST00000457889 ADCY9O60503 1353 aa11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 RBM6P78332 1123 aaKnown RBP11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 USP16Q9Y5T5 823 aa11.21□□□□□ -0.61
CDC42EP3-204ENST00000457889 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 SLC4A10Q6U841 1118 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 RPAP2Q8IXW5 612 aaPredicted RBP11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 KAT6BQ8WYB5 2073 aa11.2□□□□□ -0.62
CDC42EP3-204ENST00000457889 F6X3S4 739 aa11.19□□□□□ -0.62
CDC42EP3-204ENST00000457889 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
CDC42EP3-204ENST00000457889 BEND3Q5T5X7 828 aa11.19□□□□□ -0.62
CDC42EP3-204ENST00000457889 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
CDC42EP3-204ENST00000457889 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
CDC42EP3-204ENST00000457889 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 HMMRO75330 724 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 GNAI2P04899 355 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 SIK1P57059 783 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 COPS6Q7L5N1 327 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 MAP3K2Q9Y2U5 619 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 TJP1Q07157 1748 aa11.18□□□□□ -0.62
CDC42EP3-204ENST00000457889 RREB1Q92766 1687 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 RGL2O15211 777 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 MYL6BP14649 208 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 NBPF14Q5TI25 921 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 NBPF10Q6P3W6 841 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 DNAJC10Q8IXB1 793 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 ACSBG1Q96GR2 724 aa11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-204ENST00000457889 UTYO14607 1347 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 ANXA1P04083 346 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 MEIS3Q99687 375 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 BTAF1O14981 1849 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 COL15A1P39059 1388 aa11.16□□□□□ -0.62
CDC42EP3-204ENST00000457889 SBF2Q86WG5 1849 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 HSP90AB3PQ58FF7 597 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 KIF6Q6ZMV9 814 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 USP44Q9H0E7 712 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
CDC42EP3-204ENST00000457889 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.63
CDC42EP3-204ENST00000457889 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 ERVV-1B6SEH8 477 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 GRM8O00222 908 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 KCNQ2O43526 872 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 IGHDP01880 384 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 A1BGP04217 495 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 RXRBP28702 533 aa11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
CDC42EP3-204ENST00000457889 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms