RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 NBPF5PQ86XG9 351 aaPredicted RBP20.21■□□□□ 0.83
CROCCP4-201ENST00000457096 MAPK8IP3Q9UPT6 1336 aa20.21■□□□□ 0.83
CROCCP4-201ENST00000457096 ST5P78524 1137 aa20.2■□□□□ 0.82
CROCCP4-201ENST00000457096 HTRA3P83110 453 aa20.2■□□□□ 0.82
CROCCP4-201ENST00000457096 NIP7Q9Y221 180 aaKnown RBP eCLIP20.2■□□□□ 0.82
CROCCP4-201ENST00000457096 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
CROCCP4-201ENST00000457096 SRGNP10124 158 aa20.19■□□□□ 0.82
CROCCP4-201ENST00000457096 MYL6BP14649 208 aa20.19■□□□□ 0.82
CROCCP4-201ENST00000457096 TTLL7Q6ZT98 887 aa20.19■□□□□ 0.82
CROCCP4-201ENST00000457096 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
CROCCP4-201ENST00000457096 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
CROCCP4-201ENST00000457096 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
CROCCP4-201ENST00000457096 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
CROCCP4-201ENST00000457096 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
CROCCP4-201ENST00000457096 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
CROCCP4-201ENST00000457096 CACNA1SQ13698 1873 aa20.18■□□□□ 0.82
CROCCP4-201ENST00000457096 TIAM2Q8IVF5 1701 aa20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 RIPK4P57078 832 aa20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 RALBP1Q15311 655 aa20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
CROCCP4-201ENST00000457096 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
CROCCP4-201ENST00000457096 C16orf71Q8IYS4 520 aaPredicted RBP20.16■□□□□ 0.82
CROCCP4-201ENST00000457096 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
CROCCP4-201ENST00000457096 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
CROCCP4-201ENST00000457096 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CROCCP4-201ENST00000457096 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
CROCCP4-201ENST00000457096 ZBTB3Q9H5J0 574 aa20.15■□□□□ 0.82
CROCCP4-201ENST00000457096 GLTPD2A6NH11 291 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 ANXA1P04083 346 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 GPTP24298 496 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 SLC51AQ86UW1 340 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 CNKSR1Q969H4 720 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 TSPYL4Q9UJ04 414 aa20.14■□□□□ 0.81
CROCCP4-201ENST00000457096 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
CROCCP4-201ENST00000457096 ABCC12Q96J65 1359 aa20.13■□□□□ 0.81
CROCCP4-201ENST00000457096 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
CROCCP4-201ENST00000457096 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
CROCCP4-201ENST00000457096 PDZRN3Q9UPQ7 1066 aa20.13■□□□□ 0.81
CROCCP4-201ENST00000457096 FER1L6Q2WGJ9 1857 aa20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 MAP3K15Q6ZN16 1313 aa20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 ERFEQ4G0M1 354 aa20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 TPTE2Q6XPS3 522 aa20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
CROCCP4-201ENST00000457096 UBN2Q6ZU65 1347 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 POTECB2RU33 542 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 APLP1P51693 650 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
CROCCP4-201ENST00000457096 NPR1P16066 1061 aa20.1■□□□□ 0.81
CROCCP4-201ENST00000457096 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
CROCCP4-201ENST00000457096 ZC3H4Q9UPT8 1303 aaKnown RBP20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 GTF2E1P29083 439 aaPredicted RBP20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 PDIA6Q15084 440 aa20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 KIF6Q6ZMV9 814 aa20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 LRP10Q7Z4F1 713 aa20.09■□□□□ 0.81
CROCCP4-201ENST00000457096 ERVV-1B6SEH8 477 aa20.08■□□□□ 0.81
CROCCP4-201ENST00000457096 ZNF428Q96B54 188 aa20.08■□□□□ 0.81
CROCCP4-201ENST00000457096 ARFGEF2Q9Y6D5 1785 aa20.08■□□□□ 0.8
CROCCP4-201ENST00000457096 LTBP3Q9NS15 1303 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 NUP98P52948 1817 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 FSTL1Q12841 308 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 C3orf67Q6ZVT6 689 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 LAS1LQ9Y4W2 734 aaKnown RBP20.07■□□□□ 0.8
CROCCP4-201ENST00000457096 RGL2O15211 777 aa20.06■□□□□ 0.8
CROCCP4-201ENST00000457096 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
CROCCP4-201ENST00000457096 POTEIP0CG38 1075 aa20.05■□□□□ 0.8
CROCCP4-201ENST00000457096 POTEJP0CG39 1038 aa20.05■□□□□ 0.8
CROCCP4-201ENST00000457096 CCDC93Q567U6 631 aa20.05■□□□□ 0.8
CROCCP4-201ENST00000457096 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
CROCCP4-201ENST00000457096 SMC1BQ8NDV3 1235 aa20.05■□□□□ 0.8
CROCCP4-201ENST00000457096 AIMP1Q12904 312 aaKnown RBP20.04■□□□□ 0.8
CROCCP4-201ENST00000457096 WDR43Q15061 677 aaKnown RBP eCLIP20.04■□□□□ 0.8
CROCCP4-201ENST00000457096 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
CROCCP4-201ENST00000457096 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
CROCCP4-201ENST00000457096 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
CROCCP4-201ENST00000457096 NTSR2O95665 410 aa20.03■□□□□ 0.8
CROCCP4-201ENST00000457096 GIGYF2Q6Y7W6 1299 aaKnown RBP20.03■□□□□ 0.8
CROCCP4-201ENST00000457096 NYXQ9GZU5 481 aa20.03■□□□□ 0.8
CROCCP4-201ENST00000457096 DICER1Q9UPY3 1922 aaKnown RBP20.03■□□□□ 0.8
CROCCP4-201ENST00000457096 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 SOGA3Q5TF21 947 aa20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
CROCCP4-201ENST00000457096 CHL1O00533 1208 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms