RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.25
FAM239A-203ENST00000456563 G2E3Q7L622 706 aa22.88■■□□□ 1.25
FAM239A-203ENST00000456563 MRPL50Q8N5N7 158 aaKnown RBP22.88■■□□□ 1.25
FAM239A-203ENST00000456563 MTFR1LQ9H019 292 aa22.88■■□□□ 1.25
FAM239A-203ENST00000456563 CLEC4GQ6UXB4 293 aa22.87■■□□□ 1.25
FAM239A-203ENST00000456563 NLGN1Q8N2Q7 840 aa22.87■■□□□ 1.25
FAM239A-203ENST00000456563 BRPF1P55201 1214 aaPredicted RBP22.86■■□□□ 1.25
FAM239A-203ENST00000456563 FLIIQ13045 1269 aa22.86■■□□□ 1.25
FAM239A-203ENST00000456563 ANKRD13DQ6ZTN6 518 aa22.86■■□□□ 1.25
FAM239A-203ENST00000456563 PLBD2Q8NHP8 589 aa22.86■■□□□ 1.25
FAM239A-203ENST00000456563 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
FAM239A-203ENST00000456563 CACNA1FO60840 1977 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 ZBTB7AO95365 584 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 DDX58O95786 925 aaKnown RBP22.85■■□□□ 1.25
FAM239A-203ENST00000456563 FKBP8Q14318 412 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 ZBTB3Q9H5J0 574 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 ZNF652Q9Y2D9 606 aa22.85■■□□□ 1.25
FAM239A-203ENST00000456563 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
FAM239A-203ENST00000456563 HLFQ16534 295 aa22.84■■□□□ 1.25
FAM239A-203ENST00000456563 GIGYF2Q6Y7W6 1299 aaKnown RBP22.84■■□□□ 1.25
FAM239A-203ENST00000456563 BCORQ6W2J9 1755 aa22.84■■□□□ 1.25
FAM239A-203ENST00000456563 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
FAM239A-203ENST00000456563 KSR2Q6VAB6 950 aa22.82■■□□□ 1.24
FAM239A-203ENST00000456563 RIC3Q7Z5B4 369 aa22.82■■□□□ 1.24
FAM239A-203ENST00000456563 TM4SF1P30408 202 aa22.81■■□□□ 1.24
FAM239A-203ENST00000456563 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
FAM239A-203ENST00000456563 ATF5Q9Y2D1 282 aaPredicted RBP22.81■■□□□ 1.24
FAM239A-203ENST00000456563 PI4KAP2A4QPH2 592 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 TBC1D9BQ66K14 1250 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 PI4KAP1Q8N8J0 262 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 SPON1Q9HCB6 807 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 ATP10DQ9P241 1426 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 PTPRCP08575 1304 aa22.8■■□□□ 1.24
FAM239A-203ENST00000456563 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 ADCY9O60503 1353 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 BCAR3O75815 825 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 TCIRG1Q13488 830 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 NFIXQ14938 502 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 SGIP1Q9BQI5 828 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
FAM239A-203ENST00000456563 ZNF34Q8IZ26 560 aa22.78■■□□□ 1.24
FAM239A-203ENST00000456563 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
FAM239A-203ENST00000456563 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
FAM239A-203ENST00000456563 MMP10P09238 476 aa22.77■■□□□ 1.24
FAM239A-203ENST00000456563 PTGER2P43116 358 aa22.77■■□□□ 1.24
FAM239A-203ENST00000456563 SETDB2Q96T68 719 aa22.77■■□□□ 1.24
FAM239A-203ENST00000456563 METTL22Q9BUU2 404 aaPredicted RBP22.77■■□□□ 1.24
FAM239A-203ENST00000456563 NOB1Q9ULX3 412 aaKnown RBP22.77■■□□□ 1.24
FAM239A-203ENST00000456563 NIP7Q9Y221 180 aaKnown RBP eCLIP22.77■■□□□ 1.24
FAM239A-203ENST00000456563 POLD1P28340 1107 aa22.76■■□□□ 1.23
FAM239A-203ENST00000456563 BICDL1Q6ZP65 573 aa22.76■■□□□ 1.23
FAM239A-203ENST00000456563 DNAAF4Q8WXU2 420 aa22.76■■□□□ 1.23
FAM239A-203ENST00000456563 ARHGAP45Q92619 1136 aa22.76■■□□□ 1.23
FAM239A-203ENST00000456563 NUP98P52948 1817 aa22.75■■□□□ 1.23
FAM239A-203ENST00000456563 POLRMTO00411 1230 aaKnown RBP22.75■■□□□ 1.23
FAM239A-203ENST00000456563 DDR1Q08345 913 aa22.75■■□□□ 1.23
FAM239A-203ENST00000456563 ISCA1Q9BUE6 129 aa22.75■■□□□ 1.23
FAM239A-203ENST00000456563 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
FAM239A-203ENST00000456563 TRIM28Q13263 835 aaKnown RBP22.74■■□□□ 1.23
FAM239A-203ENST00000456563 PARP10Q53GL7 1025 aa22.74■■□□□ 1.23
FAM239A-203ENST00000456563 PARP3Q9Y6F1 533 aa22.74■■□□□ 1.23
FAM239A-203ENST00000456563 CARMIL3Q8ND23 1372 aa22.74■■□□□ 1.23
FAM239A-203ENST00000456563 F6X3S4 739 aa22.73■■□□□ 1.23
FAM239A-203ENST00000456563 IPO8O15397 1037 aaKnown RBP22.73■■□□□ 1.23
FAM239A-203ENST00000456563 GPTP24298 496 aa22.73■■□□□ 1.23
FAM239A-203ENST00000456563 MYD88Q99836 296 aa22.73■■□□□ 1.23
FAM239A-203ENST00000456563 API5Q9BZZ5 524 aaKnown RBP22.73■■□□□ 1.23
FAM239A-203ENST00000456563 UBN2Q6ZU65 1347 aa22.73■■□□□ 1.23
FAM239A-203ENST00000456563 SERPINB2P05120 415 aa22.72■■□□□ 1.23
FAM239A-203ENST00000456563 NEXNQ0ZGT2 675 aa22.72■■□□□ 1.23
FAM239A-203ENST00000456563 ATP5J2-PTCD1G3V325 749 aa22.71■■□□□ 1.23
FAM239A-203ENST00000456563 NLRP10Q86W26 655 aa22.71■■□□□ 1.23
FAM239A-203ENST00000456563 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
FAM239A-203ENST00000456563 IGKV5-2P06315 115 aa22.7■■□□□ 1.22
FAM239A-203ENST00000456563 SUSD4Q5VX71 490 aa22.7■■□□□ 1.22
FAM239A-203ENST00000456563 LINS1Q8NG48 757 aa22.7■■□□□ 1.22
FAM239A-203ENST00000456563 IBTKQ9P2D0 1353 aaPredicted RBP22.7■■□□□ 1.22
FAM239A-203ENST00000456563 ANKRD36CQ5JPF3 1778 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 BEND3Q5T5X7 828 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 ZKSCAN2Q63HK3 967 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 ATF7IPQ6VMQ6 1270 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 CCDC191Q8NCU4 936 aa22.69■■□□□ 1.22
FAM239A-203ENST00000456563 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
FAM239A-203ENST00000456563 TPTE2Q6XPS3 522 aa22.68■■□□□ 1.22
FAM239A-203ENST00000456563 NBPF5PQ86XG9 351 aaPredicted RBP22.68■■□□□ 1.22
FAM239A-203ENST00000456563 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
FAM239A-203ENST00000456563 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
FAM239A-203ENST00000456563 NTSR2O95665 410 aa22.67■■□□□ 1.22
FAM239A-203ENST00000456563 TRIM27P14373 513 aa22.67■■□□□ 1.22
FAM239A-203ENST00000456563 UTP14AQ9BVJ6 771 aaKnown RBP22.67■■□□□ 1.22
FAM239A-203ENST00000456563 CWC25Q9NXE8 425 aaPredicted RBP22.67■■□□□ 1.22
FAM239A-203ENST00000456563 NRXN2Q9P2S2 1712 aa22.67■■□□□ 1.22
FAM239A-203ENST00000456563 PXDNLA1KZ92 1463 aa22.66■■□□□ 1.22
FAM239A-203ENST00000456563 RNF123Q5XPI4 1314 aa22.66■■□□□ 1.22
FAM239A-203ENST00000456563 CWF19L2Q2TBE0 894 aaKnown RBP22.66■■□□□ 1.22
FAM239A-203ENST00000456563 PRR5LQ6MZQ0 368 aa22.66■■□□□ 1.22
FAM239A-203ENST00000456563 CNBD1Q8NA66 436 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms