RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 CLEC4GQ6UXB4 293 aa15.74■□□□□ 0.11
PDGFB-204ENST00000455790 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
PDGFB-204ENST00000455790 ZNF622Q969S3 477 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDGFB-204ENST00000455790 NPHP1O15259 732 aa15.73■□□□□ 0.11
PDGFB-204ENST00000455790 ST5P78524 1137 aa15.73■□□□□ 0.11
PDGFB-204ENST00000455790 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-204ENST00000455790 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
PDGFB-204ENST00000455790 TSPYL4Q9UJ04 414 aa15.73■□□□□ 0.11
PDGFB-204ENST00000455790 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDGFB-204ENST00000455790 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
PDGFB-204ENST00000455790 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
PDGFB-204ENST00000455790 MYL6BP14649 208 aa15.72■□□□□ 0.11
PDGFB-204ENST00000455790 TTLL7Q6ZT98 887 aa15.72■□□□□ 0.11
PDGFB-204ENST00000455790 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-204ENST00000455790 TNRC6CQ9HCJ0 1690 aaKnown RBP15.71■□□□□ 0.11
PDGFB-204ENST00000455790 C21orf2O43822 256 aa15.71■□□□□ 0.11
PDGFB-204ENST00000455790 SRGNP10124 158 aa15.71■□□□□ 0.11
PDGFB-204ENST00000455790 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
PDGFB-204ENST00000455790 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.1
PDGFB-204ENST00000455790 RGL2O15211 777 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 LMNB1P20700 586 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDGFB-204ENST00000455790 PRPF40BQ6NWY9 871 aaKnown RBP15.7■□□□□ 0.1
PDGFB-204ENST00000455790 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 ABCC12Q96J65 1359 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 SLX4Q8IY92 1834 aa15.7■□□□□ 0.1
PDGFB-204ENST00000455790 MAP3K15Q6ZN16 1313 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 PROSER3Q2NL68 480 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 STYK1Q6J9G0 422 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 ARFGEF2Q9Y6D5 1785 aa15.69■□□□□ 0.1
PDGFB-204ENST00000455790 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 ANXA1P04083 346 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 HSPA6P17066 643 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 PDIA6Q15084 440 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 KRT24Q2M2I5 525 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
PDGFB-204ENST00000455790 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 KLRG2A4D1S0 409 aaPredicted RBP15.67■□□□□ 0.1
PDGFB-204ENST00000455790 ERVV-1B6SEH8 477 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 GPTP24298 496 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 MASTLQ96GX5 879 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
PDGFB-204ENST00000455790 NUP98P52948 1817 aa15.66■□□□□ 0.1
PDGFB-204ENST00000455790 TOMM70O94826 608 aa15.66■□□□□ 0.1
PDGFB-204ENST00000455790 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
PDGFB-204ENST00000455790 TPTE2Q6XPS3 522 aa15.66■□□□□ 0.1
PDGFB-204ENST00000455790 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
PDGFB-204ENST00000455790 BABAM1Q9NWV8 329 aa15.66■□□□□ 0.1
PDGFB-204ENST00000455790 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
PDGFB-204ENST00000455790 CHL1O00533 1208 aa15.65■□□□□ 0.1
PDGFB-204ENST00000455790 NPR1P16066 1061 aa15.65■□□□□ 0.1
PDGFB-204ENST00000455790 OLFM4Q6UX06 510 aa15.65■□□□□ 0.1
PDGFB-204ENST00000455790 C7orf43Q8WVR3 580 aa15.65■□□□□ 0.1
PDGFB-204ENST00000455790 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
PDGFB-204ENST00000455790 CCDC88AQ3V6T2 1871 aa15.64■□□□□ 0.09
PDGFB-204ENST00000455790 ERFEQ4G0M1 354 aa15.64■□□□□ 0.09
PDGFB-204ENST00000455790 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
PDGFB-204ENST00000455790 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
PDGFB-204ENST00000455790 LTBP3Q9NS15 1303 aa15.64■□□□□ 0.09
PDGFB-204ENST00000455790 IBTKQ9P2D0 1353 aaPredicted RBP15.63■□□□□ 0.09
PDGFB-204ENST00000455790 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
PDGFB-204ENST00000455790 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
PDGFB-204ENST00000455790 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
PDGFB-204ENST00000455790 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
PDGFB-204ENST00000455790 GLTPD2A6NH11 291 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 NTSR2O95665 410 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-204ENST00000455790 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 C3orf67Q6ZVT6 689 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
PDGFB-204ENST00000455790 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
PDGFB-204ENST00000455790 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
PDGFB-204ENST00000455790 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
PDGFB-204ENST00000455790 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
PDGFB-204ENST00000455790 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
PDGFB-204ENST00000455790 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
PDGFB-204ENST00000455790 APAF1O14727 1248 aa15.6■□□□□ 0.09
PDGFB-204ENST00000455790 AIMP1Q12904 312 aaKnown RBP15.6■□□□□ 0.09
PDGFB-204ENST00000455790 SOGA3Q5TF21 947 aa15.6■□□□□ 0.09
PDGFB-204ENST00000455790 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
PDGFB-204ENST00000455790 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
PDGFB-204ENST00000455790 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
PDGFB-204ENST00000455790 POTECB2RU33 542 aa15.59■□□□□ 0.09
PDGFB-204ENST00000455790 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
PDGFB-204ENST00000455790 MBIPQ9NS73 344 aa15.59■□□□□ 0.09
PDGFB-204ENST00000455790 WDR90Q96KV7 1748 aa15.59■□□□□ 0.09
PDGFB-204ENST00000455790 ANKRD36CQ5JPF3 1778 aa15.58■□□□□ 0.08
PDGFB-204ENST00000455790 HDGFL1Q5TGJ6 251 aa15.58■□□□□ 0.08
PDGFB-204ENST00000455790 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms