RNA–Protein interactions for RNA: ENST00000455691.2

VPS25P1-201, Transcript of VPS25 pseudogene 1, humanhuman

BASIC

Gene VPS25P1, Length 508 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25P1-201ENST00000455691 FOXN1O15353 648 aa8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 RPS6KA4O75676 772 aa8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 HSP90AB1P08238 724 aaKnown RBP8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 ERICH6BQ5W0A0 696 aa8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 CCDC87Q9NVE4 849 aa8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 SRP68Q9UHB9 627 aaKnown RBP8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 TSPYL4Q9UJ04 414 aa8.13□□□□□ -1.11
VPS25P1-201ENST00000455691 LTBP1Q14766 1721 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 GLTPD2A6NH11 291 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 MS4A1P11836 297 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 TM4SF1P30408 202 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 RRP1P56182 461 aaKnown RBP8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 IFNL2Q8IZJ0 200 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 FRAT1Q92837 279 aaPredicted RBP8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 CHMP4AQ9BY43 222 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 PIM2Q9P1W9 311 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 CACNA1SQ13698 1873 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 SCN4AP35499 1836 aa8.12□□□□□ -1.11
VPS25P1-201ENST00000455691 CNTNAP1P78357 1384 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 PDE4DIPQ5VU43 2346 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 POTEIP0CG38 1075 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 PRDM10Q9NQV6 1147 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
VPS25P1-201ENST00000455691 SLX4Q8IY92 1834 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 BTBD11A6QL63 1104 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 IPO8O15397 1037 aaKnown RBP8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 PLIN1O60240 522 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 TWISTNBQ3B726 338 aaPredicted RBP8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 BABAM1Q9NWV8 329 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 MIS18AQ9NYP9 233 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 BCORQ6W2J9 1755 aa8.1□□□□□ -1.11
VPS25P1-201ENST00000455691 CHL1O00533 1208 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 RNMTO43148 476 aaKnown RBP8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 BCAR3O75815 825 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 ZNF853P0CG23 659 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 LMNB1P20700 586 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 RARSP54136 660 aaKnown RBP8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 CABP4P57796 275 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 CREBZFQ9NS37 354 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 PARP3Q9Y6F1 533 aa8.09□□□□□ -1.11
VPS25P1-201ENST00000455691 SOS1Q07889 1333 aaPredicted RBP8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 ERVV-2B6SEH9 535 aa8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 CRKLP46109 303 aaKnown RBP8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 ALDH1L2Q3SY69 923 aa8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 SNED1Q8TER0 1413 aa8.08□□□□□ -1.12
VPS25P1-201ENST00000455691 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 VAMP4O75379 141 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 RFC4P35249 363 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 RGS19P49795 217 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 BCL2L13Q9BXK5 485 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 WBP1LQ9NX94 342 aa8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
VPS25P1-201ENST00000455691 RNF123Q5XPI4 1314 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 LTBP3Q9NS15 1303 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 ITGBL1O95965 494 aaPredicted RBP8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 HSPA8P11142 646 aaKnown RBP8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 NFIXQ14938 502 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 CCDC30Q5VVM6 783 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 NFATC2IPQ8NCF5 419 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 NOB1Q9ULX3 412 aaKnown RBP8.06□□□□□ -1.12
VPS25P1-201ENST00000455691 COL4A5P29400 1685 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 PDE3AQ14432 1141 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 TSPYL6Q8N831 410 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 EXOC6Q8TAG9 804 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 SSH1Q8WYL5 1049 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 CHMP4BQ9H444 224 aaKnown RBP8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 SLC52A2Q9HAB3 445 aa8.05□□□□□ -1.12
VPS25P1-201ENST00000455691 KIF16BQ96L93 1317 aa8.04□□□□□ -1.12
VPS25P1-201ENST00000455691 TRPM7Q96QT4 1865 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms