RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 SYCE3A1L190 88 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 NAIPQ13075 1403 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 GIMAP7Q8NHV1 300 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 VAT1LQ9HCJ6 419 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
SCN5A-210ENST00000455624 CCDC141Q6ZP82 1450 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 RAPGEF3O95398 923 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 KIF5BP33176 963 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
SCN5A-210ENST00000455624 KIF14Q15058 1648 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 EXOC5O00471 708 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 PDE4BQ07343 736 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 ZNF354CQ86Y25 554 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 UBXN4Q92575 508 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 RFC4P35249 363 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
SCN5A-210ENST00000455624 BAG3O95817 575 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 GPTP24298 496 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
SCN5A-210ENST00000455624 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCN5A-210ENST00000455624 KIF4BQ2VIQ3 1234 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
SCN5A-210ENST00000455624 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 LDHCP07864 332 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 TMCO5BA8MYB1 307 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
SCN5A-210ENST00000455624 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
SCN5A-210ENST00000455624 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 CCT2P78371 535 aaKnown RBP11.66□□□□□ -0.54
SCN5A-210ENST00000455624 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 CTAGE5O15320 804 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 WAPLQ7Z5K2 1190 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 DNAAF4Q8WXU2 420 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 TCP11L1Q9NUJ3 509 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 PAFAH1B1P43034 410 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
SCN5A-210ENST00000455624 TSPY2A6NKD2 308 aa11.66□□□□□ -0.54
SCN5A-210ENST00000455624 CWC25Q9NXE8 425 aaPredicted RBP11.66□□□□□ -0.54
SCN5A-210ENST00000455624 TROQ12816 1431 aaPredicted RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 TTC16Q8NEE8 873 aa11.65□□□□□ -0.54
SCN5A-210ENST00000455624 C16orf71Q8IYS4 520 aaPredicted RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
SCN5A-210ENST00000455624 EVI5LQ96CN4 794 aa11.65□□□□□ -0.54
SCN5A-210ENST00000455624 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
SCN5A-210ENST00000455624 TBCAO75347 108 aaKnown RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 MICALCLQ6ZW33 695 aa11.65□□□□□ -0.54
SCN5A-210ENST00000455624 NAA15Q9BXJ9 866 aaKnown RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.54
SCN5A-210ENST00000455624 RNF187Q5TA31 235 aaPredicted RBP11.65□□□□□ -0.55
SCN5A-210ENST00000455624 MFSD6Q6ZSS7 791 aa11.65□□□□□ -0.55
SCN5A-210ENST00000455624 UTP14AQ9BVJ6 771 aaKnown RBP11.65□□□□□ -0.55
SCN5A-210ENST00000455624 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.55
SCN5A-210ENST00000455624 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.55
SCN5A-210ENST00000455624 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 CCDC174Q6PII3 467 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 URI1O94763 535 aaPredicted RBP11.64□□□□□ -0.55
SCN5A-210ENST00000455624 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
SCN5A-210ENST00000455624 DDX23Q9BUQ8 820 aaKnown RBP11.64□□□□□ -0.55
SCN5A-210ENST00000455624 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 GOLIM4O00461 696 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 PDCL2Q8N4E4 241 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
SCN5A-210ENST00000455624 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCN5A-210ENST00000455624 GRM1Q13255 1194 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 STX1AQ16623 288 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 TSPY3P0CV98 308 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 TSPY8P0CW00 308 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 GJB2P29033 226 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 NME9Q86XW9 330 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 SREK1Q8WXA9 508 aaKnown RBP11.63□□□□□ -0.55
SCN5A-210ENST00000455624 TTC12Q9H892 705 aaPredicted RBP11.63□□□□□ -0.55
SCN5A-210ENST00000455624 NOP2P46087 812 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms