RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
GTF3C2-206ENST00000454704 HSP90AA1P07900 732 aaKnown RBP13□□□□□ -0.33
GTF3C2-206ENST00000454704 GNAI3P08754 354 aa13□□□□□ -0.33
GTF3C2-206ENST00000454704 POLD1P28340 1107 aa13□□□□□ -0.33
GTF3C2-206ENST00000454704 NUCB2P80303 420 aa13□□□□□ -0.33
GTF3C2-206ENST00000454704 GPR162Q16538 588 aa13□□□□□ -0.33
GTF3C2-206ENST00000454704 STK31Q9BXU1 1019 aa13□□□□□ -0.33
GTF3C2-206ENST00000454704 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
GTF3C2-206ENST00000454704 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
GTF3C2-206ENST00000454704 AEBP1Q8IUX7 1158 aa12.99□□□□□ -0.33
GTF3C2-206ENST00000454704 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 AOX1Q06278 1338 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 DCTN1Q14203 1278 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
GTF3C2-206ENST00000454704 ST18O60284 1047 aa12.97□□□□□ -0.33
GTF3C2-206ENST00000454704 MCM2P49736 904 aa12.97□□□□□ -0.33
GTF3C2-206ENST00000454704 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
GTF3C2-206ENST00000454704 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
GTF3C2-206ENST00000454704 CCNL1Q9UK58 526 aaPredicted RBP12.97□□□□□ -0.33
GTF3C2-206ENST00000454704 GNAI2P04899 355 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 MCM10Q7L590 875 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 C5P01031 1676 aa12.96□□□□□ -0.33
GTF3C2-206ENST00000454704 HOXB7P09629 217 aa12.96□□□□□ -0.34
GTF3C2-206ENST00000454704 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.34
GTF3C2-206ENST00000454704 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.34
GTF3C2-206ENST00000454704 NBPF4Q96M43 638 aa12.96□□□□□ -0.34
GTF3C2-206ENST00000454704 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
GTF3C2-206ENST00000454704 ERC2O15083 957 aa12.95□□□□□ -0.34
GTF3C2-206ENST00000454704 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
GTF3C2-206ENST00000454704 MCCP23508 829 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 ANAPC15P60006 121 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 MEIS3Q99687 375 aa12.94□□□□□ -0.34
GTF3C2-206ENST00000454704 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 SDSP20132 328 aa12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 EYA1Q99502 592 aa12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
GTF3C2-206ENST00000454704 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
GTF3C2-206ENST00000454704 TOGARAM1Q9Y4F4 1720 aa12.92□□□□□ -0.34
GTF3C2-206ENST00000454704 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
GTF3C2-206ENST00000454704 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
GTF3C2-206ENST00000454704 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 TATP17735 454 aaPredicted RBP12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 PDE1AP54750 535 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 FLIIQ13045 1269 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 LRRCC1Q9C099 1032 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 STAP2Q9UGK3 403 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
GTF3C2-206ENST00000454704 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
GTF3C2-206ENST00000454704 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
GTF3C2-206ENST00000454704 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
GTF3C2-206ENST00000454704 HDAC5Q9UQL6 1122 aa12.9□□□□□ -0.34
GTF3C2-206ENST00000454704 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
GTF3C2-206ENST00000454704 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.35
GTF3C2-206ENST00000454704 ITGB4P16144 1822 aa12.9□□□□□ -0.35
GTF3C2-206ENST00000454704 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
GTF3C2-206ENST00000454704 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
GTF3C2-206ENST00000454704 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
GTF3C2-206ENST00000454704 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 CYP27B1O15528 508 aa12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 HSP90AB4PQ58FF6 505 aa12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-206ENST00000454704 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 MX1P20591 662 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 CLCN1P35523 988 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 ZNF445P59923 1031 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 G2E3Q7L622 706 aa12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 ANP32BQ92688 251 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-206ENST00000454704 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
GTF3C2-206ENST00000454704 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
GTF3C2-206ENST00000454704 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-206ENST00000454704 SSH3Q8TE77 659 aa12.86□□□□□ -0.35
GTF3C2-206ENST00000454704 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
GTF3C2-206ENST00000454704 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms