RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 NOC3LQ8WTT2 800 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 INSRP06213 1382 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 SSFA2P28290 1259 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 TXLNAP40222 546 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 DDB1Q16531 1140 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-203ENST00000454498 ZNF213O14771 459 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 HMGB1P09429 215 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCDC39Q9UFE4 941 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 METP08581 1390 aa11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ERVK-7P63135 1459 aa11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ESYT1Q9BSJ8 1104 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CFAP74Q9C0B2 1584 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PDE4CQ08493 712 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCDC173Q0VFZ6 552 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PIBF1Q8WXW3 757 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SMC2O95347 1197 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SOGA3Q5TF21 947 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 USP5P45974 858 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 HAND2P61296 217 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 MPNDQ8N594 471 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 WASF1Q92558 559 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PDILTQ8N807 584 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CDK5RAP3Q96JB5 506 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 BTG4Q9NY30 223 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SYCE3A1L190 88 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 HOXB7P09629 217 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 TTF1Q15361 905 aaPredicted RBP11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 DDX17Q92841 729 aaKnown RBP11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 AK7Q96M32 723 aa11.8□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 MYOM2P54296 1465 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCT2P78371 535 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SPC24Q8NBT2 197 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RPGRQ92834 1020 aaKnown RBP11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 MKNK2Q9HBH9 465 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 KDM5CP41229 1560 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
CSGALNACT1-203ENST00000454498 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 CCDC152Q4G0S7 254 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 TMX3Q96JJ7 454 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 PRDM15P57071 1507 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 EFCAB6Q5THR3 1501 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 KDM5AP29375 1690 aaKnown RBP11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 GOLGA8BA8MQT2 603 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 SEC24BO95487 1268 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RFC4P35249 363 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
CSGALNACT1-203ENST00000454498 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms