RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 FAM13AO94988 1023 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 C16orf46Q6P387 395 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 MYO19Q96H55 970 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 ASB16Q96NS5 453 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 DCTN4Q9UJW0 460 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 ADAMTS8Q9UP79 889 aa6.33□□□□□ -1.4
HMGB1P15-201ENST00000453854 UNCXA6NJT0 531 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 POU4F2Q12837 409 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 TLR1Q15399 786 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 TEAD4Q15561 434 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 GRIP2Q9C0E4 1043 aa6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 QTRT2Q9H974 415 aaKnown RBP6.32□□□□□ -1.4
HMGB1P15-201ENST00000453854 EML1O00423 815 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 TNFRSF10BO14763 440 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 ARHGEF15O94989 841 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 GPC1P35052 558 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 CENPCQ03188 943 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 KCNMA1Q12791 1236 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 DBN1Q16643 649 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 COX20Q5RI15 118 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 SVOPQ8N4V2 548 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 NBPF15Q8N660 670 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 CHMP7Q8WUX9 453 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 ZNF837Q96EG3 531 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P15-201ENST00000453854 GPR25O00155 361 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 ADAMTS2O95450 1211 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 ZNF16P17020 682 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 FBXO33Q7Z6M2 555 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 PPARGC1BQ86YN6 1023 aaKnown RBP6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 STIM2Q9P246 746 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 LRFN2Q9ULH4 789 aa6.3□□□□□ -1.4
HMGB1P15-201ENST00000453854 SERTM1A2A2V5 107 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 THBS1P07996 1170 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 MPSTP25325 297 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 MAPK1P28482 360 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 NOS2P35228 1153 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 SLC27A3Q5K4L6 730 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 LYPD4Q6UWN0 246 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 TRIM22Q8IYM9 498 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 RGL4Q8IZJ4 473 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 CITED4Q96RK1 184 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 BCL2L13Q9BXK5 485 aa6.29□□□□□ -1.4
HMGB1P15-201ENST00000453854 RIPOR1Q6ZS17 1223 aa6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 ZSCAN29Q8IWY8 852 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 GAS2L1Q99501 681 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 KIAA1522Q9P206 1035 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 CHMP3Q9Y3E7 222 aa6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
HMGB1P15-201ENST00000453854 SPATA31C2B4DYI2 1134 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 FZD6O60353 706 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 IGHA2P01877 340 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 EIF1AXP47813 144 aaKnown RBP6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 RASSF7Q02833 373 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 SRSF11Q05519 484 aaKnown RBP6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 RTN1Q16799 776 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 SH3PXD2AQ5TCZ1 1133 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 ALKBH2Q6NS38 261 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 L3MBTL2Q969R5 705 aa6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 GTPBP3Q969Y2 492 aaKnown RBP6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 ZSCAN10Q96SZ4 725 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P15-201ENST00000453854 CELA2BP08218 269 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 C1orf53Q5VUE5 145 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 TMC7Q7Z402 723 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 ALDH16A1Q8IZ83 802 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 GIPC2Q8TF65 315 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 C7orf43Q8WVR3 580 aa6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 NIFKQ9BYG3 293 aaKnown RBP6.26□□□□□ -1.41
HMGB1P15-201ENST00000453854 ZBTB39O15060 712 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 TREHO43280 583 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 NDUFB5O43674 189 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 VAMP1P23763 118 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 BRD2P25440 801 aaKnown RBP6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 C11orf91Q3C1V1 193 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 ABTB2Q8N961 1025 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 TIMMDC1Q9NPL8 285 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 CABP1Q9NZU7 370 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 BRPF3Q9ULD4 1205 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 ZNF232Q9UNY5 417 aa6.25□□□□□ -1.41
HMGB1P15-201ENST00000453854 IGF1RP08069 1367 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 GDF11O95390 407 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 PHKA2P46019 1235 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 DSC3Q14574 896 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 ZNF326Q5BKZ1 582 aaKnown RBP6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 WDR44Q5JSH3 913 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 ETFBKMTQ8IXQ9 262 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 MRRFQ96E11 262 aaKnown RBP6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 GMCL1Q96IK5 515 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 MBIPQ9NS73 344 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms