RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.76
SNX17-204ENST00000453453 RREB1Q92766 1687 aa19.82■□□□□ 0.76
SNX17-204ENST00000453453 TRIM37O94972 964 aa19.82■□□□□ 0.76
SNX17-204ENST00000453453 MAP3K2Q9Y2U5 619 aa19.82■□□□□ 0.76
SNX17-204ENST00000453453 ADCY9O60503 1353 aa19.82■□□□□ 0.76
SNX17-204ENST00000453453 ARFGEF2Q9Y6D5 1785 aa19.82■□□□□ 0.76
SNX17-204ENST00000453453 LRP10Q7Z4F1 713 aa19.81■□□□□ 0.76
SNX17-204ENST00000453453 CCDC87Q9NVE4 849 aa19.81■□□□□ 0.76
SNX17-204ENST00000453453 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
SNX17-204ENST00000453453 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
SNX17-204ENST00000453453 ITPK1Q13572 414 aa19.8■□□□□ 0.76
SNX17-204ENST00000453453 ANKRD13DQ6ZTN6 518 aa19.8■□□□□ 0.76
SNX17-204ENST00000453453 SRCIN1Q9C0H9 1055 aa19.8■□□□□ 0.76
SNX17-204ENST00000453453 CCNL1Q9UK58 526 aaPredicted RBP19.8■□□□□ 0.76
SNX17-204ENST00000453453 ZNF330Q9Y3S2 320 aaPredicted RBP19.8■□□□□ 0.76
SNX17-204ENST00000453453 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
SNX17-204ENST00000453453 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
SNX17-204ENST00000453453 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
SNX17-204ENST00000453453 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
SNX17-204ENST00000453453 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
SNX17-204ENST00000453453 C8orf34Q49A92 452 aa19.79■□□□□ 0.76
SNX17-204ENST00000453453 PLBD2Q8NHP8 589 aa19.79■□□□□ 0.76
SNX17-204ENST00000453453 ZBTB1Q9Y2K1 713 aa19.79■□□□□ 0.76
SNX17-204ENST00000453453 NUP188Q5SRE5 1749 aa19.79■□□□□ 0.76
SNX17-204ENST00000453453 ZBTB7BO15156 539 aaPredicted RBP19.78■□□□□ 0.76
SNX17-204ENST00000453453 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
SNX17-204ENST00000453453 AFDNP55196 1824 aaKnown RBP19.77■□□□□ 0.75
SNX17-204ENST00000453453 ALDH1L1O75891 902 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
SNX17-204ENST00000453453 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
SNX17-204ENST00000453453 MYH14Q7Z406 1995 aaKnown RBP19.76■□□□□ 0.75
SNX17-204ENST00000453453 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 GNAI3P08754 354 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
SNX17-204ENST00000453453 LINC00116Q8NCU8 138 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 LINS1Q8NG48 757 aa19.76■□□□□ 0.75
SNX17-204ENST00000453453 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
SNX17-204ENST00000453453 RC3H1Q5TC82 1133 aaKnown RBP19.75■□□□□ 0.75
SNX17-204ENST00000453453 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
SNX17-204ENST00000453453 ARXQ96QS3 562 aa19.75■□□□□ 0.75
SNX17-204ENST00000453453 TNS1Q9HBL0 1735 aaKnown RBP19.75■□□□□ 0.75
SNX17-204ENST00000453453 A0A087WZG4 1122 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 MYD88Q99836 296 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 ZBTB3Q9H5J0 574 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 EIF5P55010 431 aaKnown RBP19.73■□□□□ 0.75
SNX17-204ENST00000453453 MEIS3Q99687 375 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 HDAC5Q9UQL6 1122 aa19.73■□□□□ 0.75
SNX17-204ENST00000453453 IBTKQ9P2D0 1353 aaPredicted RBP19.72■□□□□ 0.75
SNX17-204ENST00000453453 MAP3K15Q6ZN16 1313 aa19.72■□□□□ 0.75
SNX17-204ENST00000453453 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
SNX17-204ENST00000453453 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
SNX17-204ENST00000453453 SOCS7O14512 581 aa19.72■□□□□ 0.75
SNX17-204ENST00000453453 APBA3O96018 575 aa19.72■□□□□ 0.75
SNX17-204ENST00000453453 KCNQ4P56696 695 aa19.72■□□□□ 0.75
SNX17-204ENST00000453453 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
SNX17-204ENST00000453453 PLSCR1O15162 318 aa19.71■□□□□ 0.75
SNX17-204ENST00000453453 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
SNX17-204ENST00000453453 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
SNX17-204ENST00000453453 C9orf78Q9NZ63 289 aaPredicted RBP19.71■□□□□ 0.75
SNX17-204ENST00000453453 COL15A1P39059 1388 aa19.71■□□□□ 0.75
SNX17-204ENST00000453453 ANKRD36CQ5JPF3 1778 aa19.71■□□□□ 0.75
SNX17-204ENST00000453453 GNAI2P04899 355 aa19.7■□□□□ 0.74
SNX17-204ENST00000453453 HSP90AB3PQ58FF7 597 aa19.7■□□□□ 0.74
SNX17-204ENST00000453453 PCDHB15Q9Y5E8 787 aa19.7■□□□□ 0.74
SNX17-204ENST00000453453 NUP98P52948 1817 aa19.7■□□□□ 0.74
SNX17-204ENST00000453453 ERVV-1B6SEH8 477 aa19.69■□□□□ 0.74
SNX17-204ENST00000453453 CWF19L2Q2TBE0 894 aaKnown RBP19.69■□□□□ 0.74
SNX17-204ENST00000453453 AK7Q96M32 723 aa19.69■□□□□ 0.74
SNX17-204ENST00000453453 USP44Q9H0E7 712 aa19.69■□□□□ 0.74
SNX17-204ENST00000453453 C1orf115Q9H7X2 142 aa19.69■□□□□ 0.74
SNX17-204ENST00000453453 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
SNX17-204ENST00000453453 GNPATO15228 680 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 RPS6KA4O75676 772 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 TXNRD1Q16881 649 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 GIGYF2Q6Y7W6 1299 aaKnown RBP19.68■□□□□ 0.74
SNX17-204ENST00000453453 FAM43AQ8N2R8 423 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
SNX17-204ENST00000453453 BCORQ6W2J9 1755 aa19.68■□□□□ 0.74
SNX17-204ENST00000453453 TCIRG1Q13488 830 aa19.67■□□□□ 0.74
SNX17-204ENST00000453453 TBC1D2BQ9UPU7 963 aa19.67■□□□□ 0.74
SNX17-204ENST00000453453 ATP5J2-PTCD1G3V325 749 aa19.66■□□□□ 0.74
SNX17-204ENST00000453453 GRM8O00222 908 aa19.66■□□□□ 0.74
SNX17-204ENST00000453453 SF3B2Q13435 895 aaKnown RBP19.66■□□□□ 0.74
SNX17-204ENST00000453453 GCKRQ14397 625 aa19.66■□□□□ 0.74
SNX17-204ENST00000453453 RPAP2Q8IXW5 612 aaPredicted RBP19.66■□□□□ 0.74
SNX17-204ENST00000453453 LRRC4BQ9NT99 713 aa19.66■□□□□ 0.74
SNX17-204ENST00000453453 CWC25Q9NXE8 425 aaPredicted RBP19.66■□□□□ 0.74
SNX17-204ENST00000453453 ZNF652Q9Y2D9 606 aa19.66■□□□□ 0.74
SNX17-204ENST00000453453 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
SNX17-204ENST00000453453 CCDC191Q8NCU4 936 aa19.65■□□□□ 0.74
SNX17-204ENST00000453453 SCN7AQ01118 1682 aa19.64■□□□□ 0.74
SNX17-204ENST00000453453 HMMRO75330 724 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 BECN1Q14457 450 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 ISCA1Q9BUE6 129 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 BRPF3Q9ULD4 1205 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 LRRFIP2Q9Y608 721 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms