RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CT47B1P0C2W7 299 aaPredicted RBP18.74■□□□□ 0.59
NCKIPSD-207ENST00000453349 FKBP8Q14318 412 aa18.74■□□□□ 0.59
NCKIPSD-207ENST00000453349 ZNF428Q96B54 188 aa18.74■□□□□ 0.59
NCKIPSD-207ENST00000453349 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
NCKIPSD-207ENST00000453349 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
NCKIPSD-207ENST00000453349 RGL2O15211 777 aa18.73■□□□□ 0.59
NCKIPSD-207ENST00000453349 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-207ENST00000453349 BCL2L12Q9HB09 334 aa18.73■□□□□ 0.59
NCKIPSD-207ENST00000453349 PPP1R1BQ9UD71 204 aaPredicted RBP18.73■□□□□ 0.59
NCKIPSD-207ENST00000453349 PARP3Q9Y6F1 533 aa18.73■□□□□ 0.59
NCKIPSD-207ENST00000453349 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
NCKIPSD-207ENST00000453349 TM4SF1P30408 202 aa18.72■□□□□ 0.59
NCKIPSD-207ENST00000453349 PTGER2P43116 358 aa18.72■□□□□ 0.59
NCKIPSD-207ENST00000453349 ANKRD13DQ6ZTN6 518 aa18.72■□□□□ 0.59
NCKIPSD-207ENST00000453349 ZBTB3Q9H5J0 574 aa18.72■□□□□ 0.59
NCKIPSD-207ENST00000453349 MMP10P09238 476 aa18.71■□□□□ 0.59
NCKIPSD-207ENST00000453349 BICDL1Q6ZP65 573 aa18.71■□□□□ 0.59
NCKIPSD-207ENST00000453349 PLBD2Q8NHP8 589 aa18.71■□□□□ 0.59
NCKIPSD-207ENST00000453349 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
NCKIPSD-207ENST00000453349 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
NCKIPSD-207ENST00000453349 HLFQ16534 295 aa18.7■□□□□ 0.58
NCKIPSD-207ENST00000453349 TBC1D9BQ66K14 1250 aa18.7■□□□□ 0.58
NCKIPSD-207ENST00000453349 GIGYF2Q6Y7W6 1299 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-207ENST00000453349 RIC3Q7Z5B4 369 aa18.7■□□□□ 0.58
NCKIPSD-207ENST00000453349 NFIXQ14938 502 aa18.69■□□□□ 0.58
NCKIPSD-207ENST00000453349 ALDH1L2Q3SY69 923 aa18.69■□□□□ 0.58
NCKIPSD-207ENST00000453349 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
NCKIPSD-207ENST00000453349 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
NCKIPSD-207ENST00000453349 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
NCKIPSD-207ENST00000453349 G2E3Q7L622 706 aa18.67■□□□□ 0.58
NCKIPSD-207ENST00000453349 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
NCKIPSD-207ENST00000453349 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
NCKIPSD-207ENST00000453349 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 SERPINB2P05120 415 aa18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 FLIIQ13045 1269 aa18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 KSR2Q6VAB6 950 aa18.66■□□□□ 0.58
NCKIPSD-207ENST00000453349 NPHP1O15259 732 aa18.65■□□□□ 0.58
NCKIPSD-207ENST00000453349 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
NCKIPSD-207ENST00000453349 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
NCKIPSD-207ENST00000453349 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
NCKIPSD-207ENST00000453349 LRP5O75197 1615 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 DDR1Q08345 913 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 CARMIL3Q8ND23 1372 aa18.64■□□□□ 0.57
NCKIPSD-207ENST00000453349 GPTP24298 496 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 PARP10Q53GL7 1025 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 TPTE2Q6XPS3 522 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 NBPF5PQ86XG9 351 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 NUP98P52948 1817 aa18.63■□□□□ 0.57
NCKIPSD-207ENST00000453349 CACNA1FO60840 1977 aa18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 GTF2E1P29083 439 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 METTL22Q9BUU2 404 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
NCKIPSD-207ENST00000453349 MYD88Q99836 296 aa18.61■□□□□ 0.57
NCKIPSD-207ENST00000453349 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
NCKIPSD-207ENST00000453349 PTPRCP08575 1304 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 BRPF1P55201 1214 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 ST5P78524 1137 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 CNBD1Q8NA66 436 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 DNAAF4Q8WXU2 420 aa18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 FHDC1Q9C0D6 1143 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-207ENST00000453349 ISCA1Q9BUE6 129 aa18.59■□□□□ 0.57
NCKIPSD-207ENST00000453349 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
NCKIPSD-207ENST00000453349 ADCY9O60503 1353 aa18.58■□□□□ 0.57
NCKIPSD-207ENST00000453349 UBN2Q6ZU65 1347 aa18.58■□□□□ 0.57
NCKIPSD-207ENST00000453349 TRIM28Q13263 835 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-207ENST00000453349 PRR5LQ6MZQ0 368 aa18.58■□□□□ 0.56
NCKIPSD-207ENST00000453349 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
NCKIPSD-207ENST00000453349 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
NCKIPSD-207ENST00000453349 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 BCAR3O75815 825 aa18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 ARFGEF2Q9Y6D5 1785 aa18.57■□□□□ 0.56
NCKIPSD-207ENST00000453349 F6X3S4 739 aa18.56■□□□□ 0.56
NCKIPSD-207ENST00000453349 TGFB2P61812 414 aa18.56■□□□□ 0.56
NCKIPSD-207ENST00000453349 SLC4A10Q6U841 1118 aa18.56■□□□□ 0.56
NCKIPSD-207ENST00000453349 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
NCKIPSD-207ENST00000453349 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 NTSR2O95665 410 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 PDE6BP35913 854 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 CCDC24Q8N4L8 307 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms