RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 KIAA1328Q86T90 577 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 LUZP1Q86V48 1076 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 JMYQ8N9B5 988 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 KDM2BQ8NHM5 1336 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 RHPN1Q8TCX5 695 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 PARD3Q8TEW0 1356 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 PPARDQ03181 441 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
RIF1-206ENST00000453091 CHPF2Q9P2E5 772 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 RPGRIP1LQ68CZ1 1315 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 RDXP35241 583 aaKnown RBP9.04□□□□□ -0.96
RIF1-206ENST00000453091 MATR3P43243 847 aaKnown RBP eCLIP9.04□□□□□ -0.96
RIF1-206ENST00000453091 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 AIDAQ96BJ3 306 aa9.04□□□□□ -0.96
RIF1-206ENST00000453091 A0A087WZG4 1122 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 SMTNL1A8MU46 457 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 G2E3Q7L622 706 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 THOC2Q8NI27 1593 aaKnown RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 GADD45BO75293 160 aaPredicted RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 KIF18AQ8NI77 898 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 TESK2Q96S53 571 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 ZNHIT6Q9NWK9 470 aaKnown RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 ZKSCAN5Q9Y2L8 839 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 SNW1Q13573 536 aaKnown RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 ERLIN1O75477 346 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 AK2P54819 239 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 ANKRD24Q8TF21 1146 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 LMAN1P49257 510 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 HSPA2P54652 639 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 GOLGA8AA7E2F4 631 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 TRMT112Q9UI30 125 aaKnown RBP9.03□□□□□ -0.96
RIF1-206ENST00000453091 JAG2Q9Y219 1238 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 USP16Q9Y5T5 823 aa9.03□□□□□ -0.96
RIF1-206ENST00000453091 TXLNAP40222 546 aa9.02□□□□□ -0.96
RIF1-206ENST00000453091 GPIHBP1Q8IV16 184 aa9.02□□□□□ -0.96
RIF1-206ENST00000453091 SCAND2PQ9GZW5 306 aaPredicted RBP9.02□□□□□ -0.96
RIF1-206ENST00000453091 F13A1P00488 732 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 NMIQ13287 307 aaPredicted RBP9.02□□□□□ -0.97
RIF1-206ENST00000453091 PHAXQ9H814 394 aaKnown RBP9.02□□□□□ -0.97
RIF1-206ENST00000453091 ECHDC1Q9NTX5 307 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 TMOD3Q9NYL9 352 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 RBM8AQ9Y5S9 174 aaKnown RBP9.02□□□□□ -0.97
RIF1-206ENST00000453091 PLEKHM2Q8IWE5 1019 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 GRIN2AQ12879 1464 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 SUPT6HQ7KZ85 1726 aaKnown RBP9.02□□□□□ -0.97
RIF1-206ENST00000453091 ATP2C2O75185 946 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 CWF19L2Q2TBE0 894 aaKnown RBP9.02□□□□□ -0.97
RIF1-206ENST00000453091 ODF2Q5BJF6 829 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 RXRAP19793 462 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 CNNM3Q8NE01 707 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 U2AF2P26368 475 aaKnown RBP eCLIP9.02□□□□□ -0.977e-7■■■■□ 21.1
RIF1-206ENST00000453091 DNAI1Q9UI46 699 aa9.02□□□□□ -0.97
RIF1-206ENST00000453091 EIF4A2Q14240 407 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 KRT32Q14532 448 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 MICU3Q86XE3 530 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 SCAF11Q99590 1463 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 MPHOSPH10O00566 681 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 SKILP12757 684 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 SMC5Q8IY18 1101 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 GPATCH11Q8N954 259 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 SH2B1Q9NRF2 756 aaPredicted RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 UBE2HP62256 183 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 KARSQ15046 597 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 CEP85Q6P2H3 762 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 ECM2O94769 699 aaPredicted RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 SLC3A2P08195 630 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 ORC3Q9UBD5 711 aaPredicted RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 DYNC1I1O14576 645 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 KIAA0754O94854 1291 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 GNG11P61952 73 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 PKP1Q13835 747 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 CCDC12Q8WUD4 166 aaPredicted RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 USP26Q9BXU7 913 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 NACAP1Q9BZK3 213 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 BCCIPQ9P287 314 aaKnown RBP eCLIP9.01□□□□□ -0.97
RIF1-206ENST00000453091 NOL7Q9UMY1 257 aaKnown RBP9.01□□□□□ -0.97
RIF1-206ENST00000453091 NDUFB9Q9Y6M9 179 aa9.01□□□□□ -0.97
RIF1-206ENST00000453091 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
RIF1-206ENST00000453091 CDR1P51861 262 aa9□□□□□ -0.97
RIF1-206ENST00000453091 Q6ZUG5 572 aa9□□□□□ -0.97
RIF1-206ENST00000453091 HELBQ8NG08 1087 aaPredicted RBP9□□□□□ -0.97
RIF1-206ENST00000453091 NUP88Q99567 741 aaPredicted RBP9□□□□□ -0.97
RIF1-206ENST00000453091 AFMP43652 599 aa9□□□□□ -0.97
RIF1-206ENST00000453091 CCDC129Q6ZRS4 1044 aa9□□□□□ -0.97
RIF1-206ENST00000453091 UBE3BQ7Z3V4 1068 aa9□□□□□ -0.97
RIF1-206ENST00000453091 DDX19AQ9NUU7 478 aaKnown RBP9□□□□□ -0.97
RIF1-206ENST00000453091 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
RIF1-206ENST00000453091 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
RIF1-206ENST00000453091 VAMP4O75379 141 aa9□□□□□ -0.97
RIF1-206ENST00000453091 ANKRD44Q8N8A2 993 aa9□□□□□ -0.97
RIF1-206ENST00000453091 KLHDC4Q8TBB5 520 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms