RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 TXLNAP40222 546 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 FOXK2Q01167 660 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 KCNA1Q09470 495 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 TEAD4Q15561 434 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 CDCA8Q53HL2 280 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
SCN3A-205ENST00000453007 SERTM1A2A2V5 107 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
SCN3A-205ENST00000453007 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 SIX5Q8N196 739 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 ZDHHC1Q8WTX9 485 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 KLRG1Q96E93 195 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 ZIC5Q96T25 663 aa9.85□□□□□ -0.83
SCN3A-205ENST00000453007 KHNYNO15037 678 aaKnown RBP9.84□□□□□ -0.83
SCN3A-205ENST00000453007 CTBSQ01459 385 aa9.84□□□□□ -0.83
SCN3A-205ENST00000453007 TSEN2Q8NCE0 465 aaKnown RBP9.84□□□□□ -0.83
SCN3A-205ENST00000453007 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
SCN3A-205ENST00000453007 TSPAN10Q9H1Z9 355 aaPredicted RBP9.84□□□□□ -0.83
SCN3A-205ENST00000453007 NEUROD4Q9HD90 331 aa9.84□□□□□ -0.83
SCN3A-205ENST00000453007 NDFIP2Q9NV92 336 aa9.84□□□□□ -0.83
SCN3A-205ENST00000453007 NESP48681 1621 aa9.83□□□□□ -0.84
SCN3A-205ENST00000453007 M0R2N6 131 aa9.83□□□□□ -0.84
SCN3A-205ENST00000453007 PSMA6P60900 246 aaKnown RBP9.83□□□□□ -0.84
SCN3A-205ENST00000453007 BAZ1AQ9NRL2 1556 aaPredicted RBP9.83□□□□□ -0.84
SCN3A-205ENST00000453007 IRS1P35568 1242 aa9.82□□□□□ -0.84
SCN3A-205ENST00000453007 SEC13P55735 322 aa9.82□□□□□ -0.84
SCN3A-205ENST00000453007 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
SCN3A-205ENST00000453007 GDF2Q9UK05 429 aaPredicted RBP9.82□□□□□ -0.84
SCN3A-205ENST00000453007 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
SCN3A-205ENST00000453007 C2CD2LO14523 706 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 OIP5O43482 229 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 ATG7O95352 703 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 MAPTP10636 758 aaKnown RBP9.81□□□□□ -0.84
SCN3A-205ENST00000453007 RASSF7Q02833 373 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 PODNQ7Z5L7 613 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
SCN3A-205ENST00000453007 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
SCN3A-205ENST00000453007 PPP1R12BO60237 982 aaPredicted RBP9.8□□□□□ -0.84
SCN3A-205ENST00000453007 GDF11O95390 407 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 CD33P20138 364 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 TNP2Q05952 138 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 LRRC69Q6ZNQ3 347 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 GOLGA6L1Q8N7Z2 621 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 RHPN1Q8TCX5 695 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 HINFPQ9BQA5 517 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 LRRC4BQ9NT99 713 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 HCN4Q9Y3Q4 1203 aa9.8□□□□□ -0.84
SCN3A-205ENST00000453007 BAZ1BQ9UIG0 1483 aaKnown RBP9.79□□□□□ -0.84
SCN3A-205ENST00000453007 TMEM88BA6NKF7 163 aa9.79□□□□□ -0.84
SCN3A-205ENST00000453007 EML1O00423 815 aa9.79□□□□□ -0.84
SCN3A-205ENST00000453007 CRTC2Q53ET0 693 aaPredicted RBP9.79□□□□□ -0.84
SCN3A-205ENST00000453007 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
SCN3A-205ENST00000453007 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
SCN3A-205ENST00000453007 DNMT3AQ9Y6K1 912 aaPredicted RBP9.79□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L15C9J2P7 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L10C9JJH3 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L13C9JLJ4 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L12C9JPN9 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L11C9JVI0 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L21D6R901 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L18D6R9N7 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L22D6RA61 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L17D6RBQ6 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L19D6RCP7 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L20D6RJB6 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 DKK1O94907 266 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 FAM157BP0CG42 384 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 USP17L24Q0WX57 530 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 DPYDQ12882 1025 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 IVNS1ABPQ9Y6Y0 642 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
SCN3A-205ENST00000453007 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 PHF20L1A8MW92 1017 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 AMPD1P23109 780 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 GSK3AP49840 483 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 PTK7Q13308 1070 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 SAMD5Q5TGI4 173 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.85
SCN3A-205ENST00000453007 SCG3Q8WXD2 468 aaKnown RBP9.77□□□□□ -0.85
SCN3A-205ENST00000453007 PHACTR1Q9C0D0 580 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 PRR12Q9ULL5 1215 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 HMGXB3Q12766 1538 aa9.77□□□□□ -0.85
SCN3A-205ENST00000453007 ATAD2Q6PL18 1390 aa9.76□□□□□ -0.85
SCN3A-205ENST00000453007 PEG3Q9GZU2 1588 aa9.76□□□□□ -0.85
SCN3A-205ENST00000453007 NEURL1BA8MQ27 555 aa9.76□□□□□ -0.85
SCN3A-205ENST00000453007 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
SCN3A-205ENST00000453007 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
SCN3A-205ENST00000453007 MARK1Q9P0L2 795 aa9.76□□□□□ -0.85
SCN3A-205ENST00000453007 GPC6Q9Y625 555 aaPredicted RBP9.76□□□□□ -0.85
SCN3A-205ENST00000453007 WIZO95785 1651 aa9.75□□□□□ -0.85
SCN3A-205ENST00000453007 SHISA8B8ZZ34 492 aa9.75□□□□□ -0.85
SCN3A-205ENST00000453007 LGR5O75473 907 aa9.75□□□□□ -0.85
SCN3A-205ENST00000453007 ARAFP10398 606 aa9.75□□□□□ -0.85
SCN3A-205ENST00000453007 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms