RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GNASQ5JWF2 1037 aa6□□□□□ -1.45
HMGB3P21-201ENST00000452483 SPTY2D1Q68D10 685 aaPredicted RBP6□□□□□ -1.45
HMGB3P21-201ENST00000452483 TMEM214Q6NUQ4 689 aaKnown RBP6□□□□□ -1.45
HMGB3P21-201ENST00000452483 TRIM50Q86XT4 487 aa6□□□□□ -1.45
HMGB3P21-201ENST00000452483 PIK3R5Q8WYR1 880 aa6□□□□□ -1.45
HMGB3P21-201ENST00000452483 SERPINB4P48594 390 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 ELOAQ14241 798 aaKnown RBP5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 RALBP1Q15311 655 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 CCDC144BQ3MJ40 725 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 HSP90AB2PQ58FF8 381 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 WDR44Q5JSH3 913 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 C9orf131Q5VYM1 1079 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 EGFLAMQ63HQ2 1017 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 APBB1IPQ7Z5R6 666 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 RHBDD1Q8TEB9 315 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 STK32AQ8WU08 396 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 NANOS1Q8WY41 292 aaKnown RBP5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 DHX38Q92620 1227 aaKnown RBP5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 KCNB2Q92953 911 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 TIMMDC1Q9NPL8 285 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 DYRK1BQ9Y463 629 aa5.99□□□□□ -1.45
HMGB3P21-201ENST00000452483 PARNO95453 639 aaKnown RBP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 SSFA2P28290 1259 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 GTF2F1P35269 517 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 PHKA2P46019 1235 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 ATP1A2P50993 1020 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 SMTNP53814 917 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 HDLBPQ00341 1268 aaKnown RBP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 FAM50AQ14320 339 aaKnown RBP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 C4orf17Q53FE4 359 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 PPARGC1BQ86YN6 1023 aaKnown RBP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 SPACA7Q96KW9 195 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 GAS2L1Q99501 681 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 ZNF358Q9NW07 568 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 SERTAD1Q9UHV2 236 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 ZMIZ1Q9ULJ6 1067 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 KIAA1024Q9UPX6 916 aa5.98□□□□□ -1.45
HMGB3P21-201ENST00000452483 A0A1B0GTH6 734 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 SCAMP3O14828 347 aaKnown RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 CLDN10P78369 228 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 RIPOR1Q6ZS17 1223 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 SV2AQ7L0J3 742 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 FBXO33Q7Z6M2 555 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 TPCN2Q8NHX9 752 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 ZNF837Q96EG3 531 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 NAP1L5Q96NT1 182 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 BACH2Q9BYV9 841 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 PRDM10Q9NQV6 1147 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 PRKAG2Q9UGJ0 569 aa5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 MKRN1Q9UHC7 482 aaKnown RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 NOVA2Q9UNW9 492 aaKnown RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 IQSEC3Q9UPP2 1182 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P21-201ENST00000452483 CCDC194A0A1B0GVG4 234 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 A6NJY4 79 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 BACH1O14867 736 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 PLA2G4AP47712 749 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 MTFR1Q15390 333 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 SMC5Q8IY18 1101 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 TRIM22Q8IYM9 498 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 VWA5B2Q8N398 1253 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 OGFOD1Q8N543 542 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZCRB1Q8TBF4 217 aaKnown RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZNF594Q96JF6 807 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 SLC4A9Q96Q91 983 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 UBA5Q9GZZ9 404 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 GPAMQ9HCL2 828 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 DNAAF2Q9NVR5 837 aaKnown RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 TERF2IPQ9NYB0 399 aa5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 NOP58Q9Y2X3 529 aaKnown RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 LAS1LQ9Y4W2 734 aaKnown RBP5.96□□□□□ -1.46
HMGB3P21-201ENST00000452483 FAM181BA6NEQ2 426 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 H7C1W4 665 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 KRT76Q01546 638 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 CCDC102BQ68D86 513 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 SIX5Q8N196 739 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 GPATCH11Q8N954 259 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 PMFBP1Q8TBY8 1022 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 GMCL1Q96IK5 515 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 PKNOX2Q96KN3 472 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 TBX22Q9Y458 520 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 USP3Q9Y6I4 520 aa5.95□□□□□ -1.46
HMGB3P21-201ENST00000452483 EIF3JO75822 258 aaKnown RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 F11P03951 625 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZEB1P37275 1124 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 EPHA4P54764 986 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 RNF187Q5TA31 235 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZNF295-AS1Q8N0V1 137 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 COL25A1Q9BXS0 654 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 NIFKQ9BYG3 293 aaKnown RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 NUCKS1Q9H1E3 243 aaKnown RBP5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZSWIM4Q9H7M6 989 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 FAN1Q9Y2M0 1017 aa5.94□□□□□ -1.46
HMGB3P21-201ENST00000452483 CDK2AP1O14519 115 aa5.93□□□□□ -1.46
HMGB3P21-201ENST00000452483 ZBTB7BO15156 539 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P21-201ENST00000452483 CREB3O43889 395 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms